Publications of Amy K Schmid    :chronological  combined  bibtex listing:

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Papers Published

  1. AK Schmid, M Pan, K Sharma, NS Baliga, Two transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon., Nucleic acids research, vol. 39 no. 7 (April, 2011), pp. 2519-33 [doi]  [abs].
  2. AK Schmid, DJ Reiss, M Pan, T Koide, NS Baliga, A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability., Molecular systems biology, England, vol. 5 (2009), pp. 282  [abs].
  3. T Koide, DJ Reiss, JC Bare, WL Pang, MT Facciotti, AK Schmid, M Pan, B Marzolf, PT Van, FY Lo, A Pratap, EW Deutsch, A Peterson, D Martin, NS Baliga, Prevalence of transcription promoters within archaeal operons and coding sequences., Molecular systems biology, vol. 5 (2009), pp. 285 [doi]  [abs].
  4. PT Van, AK Schmid, NL King, A Kaur, M Pan, K Whitehead, T Koide, MT Facciotti, YA Goo, EW Deutsch, DJ Reiss, P Mallick, NS Baliga, Halobacterium salinarum NRC-1 PeptideAtlas: toward strategies for targeted proteomics and improved proteome coverage., Journal of proteome research, vol. 7 no. 9 (September, 2008), pp. 3755-64 [doi]  [abs].
  5. R Bonneau, MT Facciotti, DJ Reiss, AK Schmid, M Pan, A Kaur, V Thorsson, P Shannon, MH Johnson, JC Bare, W Longabaugh, M Vuthoori, K Whitehead, A Madar, L Suzuki, T Mori, DE Chang, J Diruggiero, CH Johnson, L Hood, NS Baliga, A predictive model for transcriptional control of physiology in a free living cell., Cell, vol. 131 no. 7 (December, 2007), pp. 1354-65 [doi]  [abs].
  6. AK Schmid, DJ Reiss, A Kaur, M Pan, N King, PT Van, L Hohmann, DB Martin, NS Baliga, The anatomy of microbial cell state transitions in response to oxygen., Genome research, United States, vol. 17 no. 10 (October, 2007), pp. 1399-413  [abs].
  7. JC Bare, PT Shannon, AK Schmid, NS Baliga, The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications., BMC bioinformatics, England, vol. 8 (2007), pp. 456  [abs].
  8. H Rothfuss, JC Lara, AK Schmid, ME Lidstrom, Involvement of the S-layer proteins Hpi and SlpA in the maintenance of cell envelope integrity in Deinococcus radiodurans R1., Microbiology (Reading, England), England, vol. 152 no. Pt 9 (September, 2006), pp. 2779-87  [abs].
  9. A.K. Schmid, N.S. Baliga, Prokaryotic Systems Biology,, in Cell Engineering Vol. 5: Systems Biology., Cell Engineering, edited by M. Al-Rubeai and M. Fussenegger, vol. 5 (2006), pp. 395-423, Springer Press .
  10. AK Schmid, HA Howell, JR Battista, SN Peterson, ME Lidstrom, Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans., Journal of bacteriology, United States, vol. 187 no. 10 (May, 2005), pp. 3339-51  [abs].
  11. AK Schmid, HA Howell, JR Battista, SN Peterson, ME Lidstrom, HspR is a global negative regulator of heat shock gene expression in Deinococcus radiodurans., Molecular microbiology, England, vol. 55 no. 5 (March, 2005), pp. 1579-90  [abs].
  12. AK Schmid, MS Lipton, H Mottaz, ME Monroe, RD Smith, ME Lidstrom, Global whole-cell FTICR mass spectrometric proteomics analysis of the heat shock response in the radioresistant bacterium Deinococcus radiodurans., Journal of proteome research, United States, vol. 4 no. 3 (2005), pp. 709-18  [abs].
  13. AK Schmid, ME Lidstrom, Involvement of two putative alternative sigma factors in stress response of the radioresistant bacterium Deinococcus radiodurans., Journal of bacteriology, United States, vol. 184 no. 22 (November, 2002), pp. 6182-9  [abs].

Papers Submitted

  1. Kriti Sharma, Nicolas Gillum, J. Lomax Boyd, Amy K. Schmid, RosR is a haloarchaeal-specific transcription factor required for the response to extreme oxidative stress in Halobacterium salinarum, Journal of Biological Chemistry (December, 2011)  [abs].

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