Publications of James S. Clark    :chronological  alphabetical  combined  bibtex listing:

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Books

  1. J.S. Clark, Models for Ecological Data (under contract), Princeton University Press .
  2. J.S. Clark, Ecological data models with R (under contract), Princeton University Press .
  3. Clark, J.S. and A. Gelfand (eds.), Applications of Computational Statistics in the Environmental Sciences: Hierarchical Bayes and MCMC Methods (under contract), Oxford University Press .
  4. Clark, J.S., B.J. Stocks, H. Cachier, and J.G. Goldammer (eds.), Sediment Records of Biomass Burning and Global Change (1997), Springer Verlag, Berlin, Germany .

Papers Published

  1. Seyednasrollah, B; Domec, JC; Clark, JS, Spatiotemporal sensitivity of thermal stress for monitoring canopy hydrological stress in near real-time, Agricultural and Forest Meteorology, vol. 269-270 (May, 2019), pp. 220-230 [doi]  [abs].
  2. Knoepp, JD; See, CR; Vose, JM; Miniat, CF; Clark, JS, Total C and N Pools and Fluxes Vary with Time, Soil Temperature, and Moisture Along an Elevation, Precipitation, and Vegetation Gradient in Southern Appalachian Forests, Ecosystems, vol. 21 no. 8 (December, 2018), pp. 1623-1638, Springer Nature America, Inc [doi]  [abs].
  3. Berdanier, AB; Clark, JS, Tree water balance drives temperate forest responses to drought., Ecology, vol. 99 no. 11 (November, 2018), pp. 2506-2514 [doi]  [abs].
  4. Schliep, EM; Gelfand, AE; Clark, JS; Kays, R, Joint Temporal Point Pattern Models for Proximate Species Occurrence in a Fixed Area Using Camera Trap Data, Journal of Agricultural, Biological, and Environmental Statistics, vol. 23 no. 3 (September, 2018), pp. 334-357, Springer Nature America, Inc [doi]  [abs].
  5. Seyednasrollah, B; Jennifer J. Swenson, ; Jean-Christophe Domec, ; James S. Clark,, Leaf phenology paradox: Why warming matters most where it is already warm, Remote Sensing of Environment, vol. 209 (May, 2018), pp. 446-455, Elsevier BV [doi]  [abs].
  6. Bachelot, B; Uriarte, M; Muscarella, R; Forero-Montaña, J; Thompson, J; McGuire, K; Zimmerman, J; Swenson, NG; Clark, JS, Associations among arbuscular mycorrhizal fungi and seedlings are predicted to change with tree successional status., Ecology, vol. 99 no. 3 (March, 2018), pp. 607-620 [doi]  [abs].
  7. Clark, JS, Relationships among individual plant growth and the dynamics of populations and ecosystems (January, 2018), pp. 421-454, Chapman and Hall/CRC [doi]  [abs].
  8. Usinowicz, J; Chang-Yang, C-H; Chen, Y-Y; Clark, JS; Fletcher, C; Garwood, NC; Hao, Z; Johnstone, J; Lin, Y; Metz, MR; Masaki, T; Nakashizuka, T; Sun, I-F; Valencia, R; Wang, Y; Zimmerman, JK; Ives, AR; Wright, SJ, Temporal coexistence mechanisms contribute to the latitudinal gradient in forest diversity., Nature, vol. 550 no. 7674 (October, 2017), pp. 105-108 [doi]  [abs].
  9. Goñi, MFS; Desprat, S; Daniau, AL; Bassinot, FC; Polanco-Martínez, JM; Harrison, SP; Allen, JRM; Scott Anderson, R; Behling, H; Bonnefille, R; Burjachs, F; Carrión, JS; Cheddadi, R; Clark, JS; Combourieu-Nebout, N; Mustaphi, CJC; Debusk, GH; Dupont, LM; Finch, JM; Fletcher, WJ; Giardini, M; González, C; Gosling, WD; Grigg, LD; Grimm, EC; Hayashi, R; Helmens, K; Heusser, LE; Hill, T; Hope, G; Huntley, B; Igarashi, Y; Irino, T; Jacobs, B; Jiménez-Moreno, G; Kawai, S; Peter Kershaw, A; Kumon, F; Lawson, IT; Ledru, MP; Lézine, AM; Mei Liew, P; Magri, D; Marchant, R; Margari, V; Mayle, FE; Merna Mckenzie, G; Moss, P; Müller, S; Müller, UC; Naughton, F; Newnham, RM; Oba, T; Pérez-Obiol, R; Pini, R; Ravazzi, C; Roucoux, KH; Rucina, SM; Scott, L; Takahara, H; Tzedakis, PC; Urrego, DH; Van Geel, B; Guido Valencia, B; Vandergoes, MJ; Vincens, A; Whitlock, CL; Willard, DA; Yamamoto, M, The ACER pollen and charcoal database: A global resource to document vegetation and fire response to abrupt climate changes during the last glacial period, Earth System Science Data, vol. 9 no. 2 (September, 2017), pp. 679-695, Copernicus GmbH [doi]  [abs].
  10. Kim, D; Oren, R; Clark, JS; Palmroth, S; Oishi, AC; McCarthy, HR; Maier, CA; Johnsen, K, Dynamics of soil CO2 efflux under varying atmospheric CO2 concentrations reveal dominance of slow processes., Global Change Biology, vol. 23 no. 9 (September, 2017), pp. 3501-3512 [doi]  [abs].
  11. Schliep, EM; Gelfand, AE; Clark, JS; Tomasek, BJ, Biomass prediction using a density-dependent diameter distribution model, The Annals of Applied Statistics, vol. 11 no. 1 (March, 2017), pp. 340-361, Institute of Mathematical Statistics [doi]  [abs].
  12. Clark, JS; Nemergut, D; Seyednasrollah, B; Turner, PJ; Zhang, S, Generalized joint attribute modeling for biodiversity analysis: Median-zero, multivariate, multifarious data, Ecological Monographs, vol. 87 no. 1 (February, 2017), pp. 34-56, WILEY [doi]  [abs].
  13. Taylor-Rodríguez, D; Kaufeld, K; Schliep, EM; Clark, JS; Gelfand, AE, Joint species distribution modeling: Dimension reduction using Dirichlet processes, Bayesian Analysis, vol. 12 no. 4 (January, 2017), pp. 939-967, Institute of Mathematical Statistics [doi]  [abs].
  14. Vose, JM; Clark, JS; Luce, CH, Introduction to drought and US forests: Impacts and potential management responses, Forest Ecology and Management, vol. 380 (November, 2016), pp. 296-298, Elsevier BV [doi] .
  15. Crowther, TW; Todd-Brown, KEO; Rowe, CW; Wieder, WR; Carey, JC; Machmuller, MB; Snoek, BL; Fang, S; Zhou, G; Allison, SD; Blair, JM; Bridgham, SD; Burton, AJ; Carrillo, Y; Reich, PB; Clark, JS; Classen, AT; Dijkstra, FA; Elberling, B; Emmett, BA; Estiarte, M; Frey, SD; Guo, J; Harte, J; Jiang, L; Johnson, BR; Kröel-Dulay, G; Larsen, KS; Laudon, H; Lavallee, JM; Luo, Y; Lupascu, M; Ma, LN; Marhan, S; Michelsen, A; Mohan, J; Niu, S; Pendall, E; Peñuelas, J; Pfeifer-Meister, L; Poll, C; Reinsch, S; Reynolds, LL; Schmidt, IK; Sistla, S; Sokol, NW; Templer, PH; Treseder, KK; Welker, JM; Bradford, MA, Quantifying global soil carbon losses in response to warming., Nature, vol. 540 no. 7631 (November, 2016), pp. 104-108 [doi]  [abs].
  16. Berdanier, AB; Miniat, CF; Clark, JS, Predictive models for radial sap flux variation in coniferous, diffuse-porous and ring-porous temperate trees., Tree Physiology, vol. 36 no. 8 (August, 2016), pp. 932-941 [doi]  [abs].
  17. Clark, JS, Why species tell more about traits than traits about species: predictive analysis., Ecology, vol. 97 no. 8 (August, 2016), pp. 1979-1993 [doi]  [abs].
  18. Clark, JS; Vose, JM; Luce, CH, Forest drought as an emerging research priority., Global Change Biology, vol. 22 no. 7 (July, 2016), pp. 2317 [doi] .
  19. Clark, JS; Iverson, L; Woodall, CW; Allen, CD; Bell, DM; Bragg, DC; D'Amato, AW; Davis, FW; Hersh, MH; Ibanez, I; Jackson, ST; Matthews, S; Pederson, N; Peters, M; Schwartz, MW; Waring, KM; Zimmermann, NE, The impacts of increasing drought on forest dynamics, structure, and biodiversity in the United States., Global Change Biology, vol. 22 no. 7 (July, 2016), pp. 2329-2352 [doi]  [abs].
  20. Berdanier, AB; Clark, JS, Divergent reproductive allocation trade-offs with canopy exposure across tree species in temperate forests, Ecosphere, vol. 7 no. 6 (June, 2016), pp. e01313-e01313, WILEY [doi]  [abs].
  21. Bell, DM; Clark, JS, Seed predation and climate impacts on reproductive variation in temperate forests of the southeastern USA., Oecologia, vol. 180 no. 4 (April, 2016), pp. 1223-1234 [doi]  [abs].
  22. Schliep, EM; Gelfand, AE; Clark, JS; Zhu, K, Modeling change in forest biomass across the eastern US, Environmental and Ecological Statistics, vol. 23 no. 1 (March, 2016), pp. 23-41, Springer Nature [doi]  [abs].
  23. Ghosh, S; Zhu, K; Gelfand, AE; Clark, JS, Joint Modeling of Climate Niches for Adult and Juvenile Trees, Journal of Agricultural, Biological, and Environmental Statistics, vol. 21 no. 1 (March, 2016), pp. 111-130, Springer Nature [doi]  [abs].
  24. Schick, RS; Kraus, SD; Rolland, RM; Knowlton, AR; Hamilton, PK; Pettis, HM; Thomas, L; Harwood, J; Clark, JS, Effects of Model Formulation on Estimates of Health in Individual Right Whales (Eubalaena glacialis)., vol. 875 (January, 2016), pp. 977-985 [doi]  [abs].
  25. Rolland, RM; Schick, RS; Pettis, HM; Knowlton, AR; Hamilton, PK; Clark, JS; Kraus, SD, Health of North Atlantic right whales Eubalaena glacialis over three decades: From individual health to demographic and population health trends, Marine Ecology Progress Series, vol. 542 (January, 2016), pp. 265-282, Inter-Research Science Center [doi]  [abs].
  26. Berdanier, AB; Clark, JS, Multiyear drought-induced morbidity preceding tree death in southeastern U.S. forests., Ecological Applications : a Publication of the Ecological Society of America, vol. 26 no. 1 (January, 2016), pp. 17-23, WILEY [doi]  [abs].
  27. Oedekoven, C; Fleishman, E; Hamilton, P; Clark, JS; Schick, RS, Expert elicitation of seasonal abundance of North Atlantic right whales Eubalaena glacialis in the mid-Atlantic, Endangered Species Research, vol. 29 no. 1 (January, 2016), pp. 51-58, Inter-Research Science Center [doi]  [abs].
  28. Schliep, EM; Gelfand, AE; Clark, JS, Stochastic Modeling for Velocity of Climate Change, Journal of Agricultural, Biological, and Environmental Statistics, vol. 20 no. 3 (September, 2015), pp. 323-342, Springer Nature [doi]  [abs].
  29. Zhu, K; Woodall, CW; Monteiro, JVD; Clark, JS, Prevalence and strength of density-dependent tree recruitment., Ecology, vol. 96 no. 9 (September, 2015), pp. 2319-2327 [doi]  [abs].
  30. Bell, DM; Ward, EJ; Oishi, AC; Oren, R; Flikkema, PG; Clark, JS, A state-space modeling approach to estimating canopy conductance and associated uncertainties from sap flux density data., Tree Physiology, vol. 35 no. 7 (July, 2015), pp. 792-802 [doi]  [abs].
  31. Clark, JS; Gelfand, AE; Woodall, CW; Zhu, K, More than the sum of the parts: forest climate response from joint species distribution models., Ecological Applications : a Publication of the Ecological Society of America, vol. 24 no. 5 (July, 2014), pp. 990-999 [doi]  [abs].
  32. Clark, JS; Melillo, J; Mohan, J; Salk, C, The seasonal timing of warming that controls onset of the growing season, Global Change Biology, vol. 20 no. 4 (April, 2014), pp. 1136-1145 [doi]  [abs].
  33. Clark, JS; Melillo, J; Mohan, J; Salk, C, The seasonal timing of warming that controls onset of the growing season., Global Change Biology, vol. 20 no. 4 (April, 2014), pp. 1136-1145 [24115181], [doi]  [abs].
  34. Wu, W; Clark, JS; Vose, JM, Response of hydrology to climate change in the southern Appalachian Mountains using Bayesian inference, Hydrological Processes, vol. 28 no. 4 (February, 2014), pp. 1616-1626 [doi]  [abs].
  35. New, LF; Clark, JS; Costa, DP; Fleishman, E; Hindell, MA; Klanjšček, T; Lusseau, D; Kraus, S; McMahon, CR; Robinson, PW; Schick, RS; Schwarz, LK; Simmons, SE; Thomas, L; Tyack, P; Harwood, J, Using short-term measures of behaviour to estimate long-term fitness of southern elephant seals, Marine Ecology Progress Series, vol. 496 (January, 2014), pp. 99-108, Inter-Research Science Center [doi]  [abs].
  36. Clark, JS; Salk, C; Melillo, J; Mohan, J, Tree phenology responses to winter chilling, spring warming, at north and south range limits, Functional Ecology., vol. 28 no. 6 (January, 2014), pp. 1344-1355 [doi]  [abs].
  37. Clark, JS; Bell, DM; Kwit, MC; Zhu, K, Competition-interaction landscapes for the joint response of forests to climate change, Global Change Biology, vol. 20 no. 6 (January, 2014), pp. 1979-1991 [doi]  [abs].
  38. Zhu, K; Woodall, CW; Ghosh, S; Gelfand, AE; Clark, JS, Dual impacts of climate change: Forest migration and turnover through life history, Global Change Biology, vol. 20 no. 1 (January, 2014), pp. 251-264 [doi]  [abs].
  39. Ghosh, S; Bell, DM; Clark, JS; Gelfand, AE; Flikkema, PG, Process modeling for soil moisture using sensor network data, Statistical Methodology, vol. 17 no. C (January, 2014), pp. 99-112, Elsevier BV [doi]  [abs].
  40. Zhu, K; Woodall, CW; Ghosh, S; Gelfand, AE; Clark, JS, Dual impacts of climate change: forest migration and turnover through life history., Global Change Biology, vol. 20 no. 1 (January, 2014), pp. 251-264 [24014498], [doi]  [abs].
  41. Clark, JS; Salk, C; Melillo, J; Mohan, J, Tree phenology responses to winter chilling, spring warming, at north and south range limits, edited by Anten, N, Functional Ecology., vol. 28 no. 6 (2014), pp. 1344-1355 [doi]  [abs].
  42. Clark, JS; Melillo, J; Mohan, J; Salk, C, The seasonal timing of warming that controls onset of the growing season, Global Change Biology, vol. 20 no. 4 (2014), pp. 1136-1145 .
  43. Benítez, MS; Hersh, MH; Vilgalys, R; Clark, JS, Pathogen regulation of plant diversity via effective specialization, Trends in Ecology and Evolution, vol. 28 no. 12 (December, 2013), pp. 705-711 [doi]  [abs].
  44. Benítez, M-S; Hersh, MH; Vilgalys, R; Clark, JS, Pathogen regulation of plant diversity via effective specialization., Trends in Ecology and Evolution, vol. 28 no. 12 (December, 2013), pp. 705-711 [24091206], [doi]  [abs].
  45. Schick, RS; Roberts, JJ; Eckert, SA; Halpin, PN; Bailey, H; Chai, F; Shi, L; Clark, JS, Pelagic movements of pacific leatherback turtles (dermochelys coriacea) highlight the role of prey and ocean currents, Movement Ecology, vol. 1 no. 1 (November, 2013), pp. 11-11, Springer Nature [doi]  [abs].
  46. Bugalho, MN; Ibáñez, I; Clark, JS, The effects of deer herbivory and forest type on tree recruitment vary with plant growth stage, Forest Ecology and Management, vol. 308 (November, 2013), pp. 90-100, Elsevier BV [doi]  [abs].
  47. Gelfand, AE; Ghosh, S; Clark, JS, Scaling integral projection models for analyzing size demography, Statistical Science, vol. 28 no. 4 (November, 2013), pp. 641-658, Institute of Mathematical Statistics [doi]  [abs].
  48. Schick, RS; New, LF; Thomas, L; Costa, DP; Hindell, MA; Mcmahon, CR; Robinson, PW; Simmons, SE; Thums, M; Harwood, J; Clark, JS, Estimating resource acquisition and at-sea body condition of a marine predator, The Journal of Animal Ecology, vol. 82 no. 6 (November, 2013), pp. 1300-1315 [doi]  [abs].
  49. Schick, RS; New, LF; Thomas, L; Costa, DP; Hindell, MA; McMahon, CR; Robinson, PW; Simmons, SE; Thums, M; Harwood, J; Clark, JS, Estimating resource acquisition and at-sea body condition of a marine predator., The Journal of Animal Ecology, vol. 82 no. 6 (November, 2013), pp. 1300-1315 [23869551], [doi]  [abs].
  50. Clark, JS; Bell, DM; Kwit, M; Powell, A; Zhu, K, Dynamic Inverse Prediction and Sensitivity Analysis With High-Dimensional Responses: Application to Climate-Change Vulnerability of Biodiversity, Journal of Agricultural, Biological, and Environmental Statistics, vol. 18 no. 3 (September, 2013), pp. 376-404, Springer Nature [doi]  [abs].
  51. New, LF; Harwood, J; Thomas, L; Donovan, C; Clark, JS; Hastie, G; Thompson, PM; Cheney, B; Scott-Hayward, L; Lusseau, D, Modelling the biological significance of behavioural change in coastal bottlenose dolphins in response to disturbance, edited by Costa, D, Functional Ecology., vol. 27 no. 2 (April, 2013), pp. 314-322, WILEY [doi]  [abs].
  52. Ward, EJ; Oren, R; Bell, DM; Clark, JS; McCarthy, HR; Kim, H-S; Domec, J-C, The effects of elevated CO2 and nitrogen fertilization on stomatal conductance estimated from 11 years of scaled sap flux measurements at Duke FACE., Tree Physiology, vol. 33 no. 2 (February, 2013), pp. 135-151, Oxford University Press [23243030], [doi]  [abs].
  53. Ward, EJ; Bell, DM; Clark, JS; Oren, R, Hydraulic time constants for transpiration of loblolly pine at a free-air carbon dioxide enrichment site., Tree Physiology, vol. 33 no. 2 (February, 2013), pp. 123-134, Oxford University Press [23192973], [doi]  [abs].
  54. Valle, D; Clark, J, Improving the modeling of disease data from the government surveillance system: a case study on malaria in the Brazilian Amazon., Plos Computational Biology, vol. 9 no. 11 (January, 2013), pp. e1003312 [doi]  [abs].
  55. Schick, RS; Kraus, SD; Rolland, RM; Knowlton, AR; Hamilton, PK; Pettis, HM; Kenney, RD; Clark, JS, Using hierarchical bayes to understand movement, health, and survival in the endangered north atlantic right whale., Plos One, vol. 8 no. 6 (January, 2013), pp. e64166 [23762237], [doi]  [abs].
  56. Valle, D; Clark, J, Conservation efforts may increase malaria burden in the Brazilian Amazon., Plos One, vol. 8 no. 3 (January, 2013), pp. e57519 [doi]  [abs].
  57. J.S. Clark, see cv (2013) .
  58. Clark, JS; Bell, DM; Kwit, M; Powell, A; Zhu, K, Dynamic Inverse Prediction and Sensitivity Analysis With High-Dimensional Responses: Application to Climate-Change Vulnerability of Biodiversity, Journal of Agricultural, Biological, and Environmental Statistics, vol. 18 no. 3 (2013), pp. 376-404 [doi]  [abs].
  59. New, LF; Harwood, J; Thomas, L; Donovan, C; Clark, JS; Hastie, G; Thompson, PM; Cheney, B; Scott-Hayward, L; Lusseau, D, Modelling the biological significance of behavioural change in coastal bottlenose dolphins in response to disturbance, Functional Ecology., vol. 27 no. 2 (2013), pp. 314-322 [doi]  [abs].
  60. Wu, W; Clark, JS; Vose, JM, Response of hydrology to climate change in the southern Appalachian Mountains using Bayesian inference, Hydrological Processes, vol. 28 no. 4 (2013), pp. 1616-1626, WILEY [doi] .
  61. Ghosh, S; Gelfand, AE; Clark, JS, Inference for Size Demography from Point Pattern Data using Integral Projection Models., Journal of Agricultural, Biological, and Environmental Statistics, vol. 17 no. 4 (December, 2012), pp. 641-677 [doi]  [abs].
  62. Ghosh, S; Gelfand, AE; Clark, JS, Rejoinder, Journal of Agricultural, Biological, and Environmental Statistics, vol. 17 no. 4 (December, 2012), pp. 693-699, Springer Nature [doi] .
  63. Rapp, JM; Silman, MR; Clark, JS; Girardin, CAJ; Galiano, D; Tito, R, Intra- and interspecific tree growth across a long altitudinal gradient in the Peruvian Andes., Ecology, vol. 93 no. 9 (September, 2012), pp. 2061-2072 [doi]  [abs].
  64. Ghosh, S; Gelfand, AE; Zhu, K; Clark, JS, The k-ZIG: flexible modeling for zero-inflated counts., Biometrics, vol. 68 no. 3 (September, 2012), pp. 878-885, Blackwell Publishing Inc [22348816], [doi]  [abs].
  65. Clark, JS, The missing link: From island extinction to Neutral Theory (a reply to Halley and Iwasa), Trends in Ecology and Evolution, vol. 27 no. 7 (July, 2012), pp. 364, Elsevier BV [doi] .
  66. Moran, EV; Clark, JS, Causes and consequences of unequal seedling production in forest trees: a case study in red oaks., Ecology, vol. 93 no. 5 (May, 2012), pp. 1082-1094, Ecological Society of America [doi]  [abs].
  67. Clark, JS, The coherence problem with the Unified Neutral Theory of Biodiversity., Trends in Ecology and Evolution, vol. 27 no. 4 (April, 2012), pp. 198-202, Elsevier Current Trends [22401902], [doi]  [abs].
  68. Hersh, MH; Vilgalys, R; Clark, JS, Evaluating the impacts of multiple generalist fungal pathogens on temperate tree seedling survival., Ecology, vol. 93 no. 3 (March, 2012), pp. 511-520, Ecological Society of America [22624206], [doi]  [abs].
  69. Zhu, K; Woodall, CW; Clark, JS, Failure to migrate: Lack of tree range expansion in response to climate change, Global Change Biology, vol. 18 no. 3 (March, 2012), pp. 1042-1052, WILEY [pdf], [doi]  [abs].
  70. Evans, LM; Clark, JS; Whipple, AV; Whitham, TG, The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance., Oecologia, vol. 168 no. 2 (February, 2012), pp. 483-489 [doi]  [abs].
  71. Clark, JS; Soltoff, BD; Powell, AS; Read, QD, Evidence from individual inference for high-dimensional coexistence: long-term experiments on recruitment response., Plos One, vol. 7 no. 2 (January, 2012), pp. e30050, Public Library of Science [22393349], [doi]  [abs].
  72. Uriarte, M; Clark, JS; Zimmerman, JK; Comita, LS; Forero-Montaña, J; Thompson, J, Multidimensional trade-offs in species responses to disturbance: implications for diversity in a subtropical forest., Ecology, vol. 93 no. 1 (January, 2012), pp. 191-205, Ecological Society of America [doi]  [abs].
  73. Moran, EV; Willis, J; Clark, JS, Genetic evidence for hybridization in red oaks (Quercus sect. Lobatae, Fagaceae)., American Journal of Botany, vol. 99 no. 1 (January, 2012), pp. 92-100, Botanical Soc America [doi]  [abs].
  74. Moran, EV; Clark, JS, Between-site differences in the scale of dispersal and gene flow in red oak., Plos One, vol. 7 no. 5 (January, 2012), pp. e36492, Public Library of Science [doi]  [abs].
  75. Clark, JS; Bell, DM; Kwit, M; Stine, A; Vierra, B; Zhu, K, Individual-scale inference to anticipate climate-change vulnerability of biodiversity., Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 367 no. 1586 (January, 2012), pp. 236-246, The Royal Society [22144386], [doi]  [abs].
  76. Colchero, F; Clark, JS, Bayesian inference on age-specific survival for censored and truncated data., The Journal of Animal Ecology, vol. 81 no. 1 (January, 2012), pp. 139-149 [pdf], [doi]  [abs].
  77. Zhu, K. and Woodall, C.W. and Clark, J.S., Failure to migrate: lack of tree range expansion in response to climate change, Global Change Biology (2012) .
  78. Evans, L.M. and Clark, J.S. and Whipple, A.V. and Whitham, T.G., The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance, Oecologia, vol. 168 no. 2 (2012), pp. 483--489, Springer Berlin/Heidelberg .
  79. Wei, W; Clark, JS; Vose, JM, Application of a Full Hierarchical Bayesian Model in Assessing Streamflow Response to a Climate Change Scenario at the Coweeta Basin, NC, USA, Journal of Resources and Ecology, vol. 3 no. 2 (2012), pp. 118-128, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences .
  80. Clark, JS; Bell, DM; Hersh, MH; Kwit, MC; Moran, E; Salk, C; Stine, A; Valle, D; Zhu, K, Individual-scale variation, species-scale differences: inference needed to understand diversity., Ecology Letters, vol. 14 no. 12 (December, 2011), pp. 1273-1287 [21978194], [doi]  [abs].
  81. Agarwal, PK; Mølhave, T; Yu, H; Clark, JS, Exploiting temporal coherence in forest dynamics simulation, in COMPUTATIONAL GEOMETRY (SCG 11), Proceedings of the Annual Symposium on Computational Geometry (July, 2011), pp. 77-86, ACM Press [doi]  [abs].
  82. Clark, James S.; Agarwal, Pankaj; Bell, David M.; Flikkema, Paul G.; Gelfand, Alan; Nguyen, Xuanlong; Ward, Eric; Yang, Jun, Inferential ecosystem models, from network data to prediction, ECOLOGICAL APPLICATIONS, vol. 21 no. 5 (July, 2011), pp. 1523-1536  [abs].
  83. Luo, Y; Ogle, K; Tucker, C; Fei, S; Gao, C; LaDeau, S; Clark, JS; Schimel, DS, Ecological forecasting and data assimilation in a data-rich era., Ecological Applications : a Publication of the Ecological Society of America, vol. 21 no. 5 (July, 2011), pp. 1429-1442 [doi]  [abs].
  84. Clark, JS; Agarwal, P; Bell, DM; Flikkema, PG; Gelfand, A; Nguyen, X; Ward, E; Yang, J, Inferential ecosystem models, from network data to prediction., Ecological Applications : a Publication of the Ecological Society of America, vol. 21 no. 5 (July, 2011), pp. 1523-1536 [21830699], [doi]  [abs].
  85. Clark, James S.; Bell, David M.; Hersh, Michelle H.; Nichols, Lauren, Climate change vulnerability of forest biodiversity: climate and competition tracking of demographic rates, GLOBAL CHANGE BIOLOGY, vol. 17 no. 5 (May, 2011), pp. 1834-1849 [doi]  [abs].
  86. Clark, JS; Bell, DM; Hersh, MH; Nichols, L, Climate change vulnerability of forest biodiversity: Climate and competition tracking of demographic rates, Global Change Biology, vol. 17 no. 5 (May, 2011), pp. 1834-1849, WILEY [doi]  [abs].
  87. Moran, Emily V. and Clark, James S., Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data, MOLECULAR ECOLOGY, vol. 20 no. 6 (March, 2011), pp. 1248-1262 [doi]  [abs].
  88. Clark, JS, not complete, please see CV, Aapg Bulletin (Spring, 2011) .
  89. Moran, EV; Clark, JS, Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data., Molecular Ecology, vol. 20 no. 6 (March, 2011), pp. 1248-1262 [21332584], [doi]  [abs].
  90. Luo, Yiqi; Melillo, Jerry; Niu, Shuli; Beier, Claus; Clark, James S.; Classen, Aimee T.; Davidson, Eric; Dukes, Jeffrey S.; Evans, R. Dave; Field, Christopher B.; Czimczik, Claudia I.; Keller, Michael and Kimball, Bruce A.; Kueppers, Lara M.; Norby, Richard J.; Pelini, Shannon L.; Pendall, Elise; Rastetter, Edward; Six, Johan; Smith, Melinda; Tjoelker, Mark G.; Torn, Margaret S., Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, GLOBAL CHANGE BIOLOGY, vol. 17 no. 2 (February, 2011), pp. 843-854 [doi]  [abs].
  91. Luo, Y; Melillo, J; Niu, S; Beier, C; Clark, JS; Classen, AT; Davidson, E; Dukes, JS; Evans, RD; Field, CB; Czimczik, CI; Keller, M; Kimball, BA; Kueppers, LM; Norby, RJ; Pelini, SL; Pendall, E; Rastetter, E; Six, J; Smith, M; Tjoelker, MG; Torn, MS, Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, Global Change Biology, vol. 17 no. 2 (February, 2011), pp. 843-854, WILEY [doi]  [abs].
  92. Valle, D; Clark, JS; Zhao, K, Enhanced understanding of infectious diseases by fusing multiple datasets: a case study on malaria in the Western Brazilian Amazon region., Plos One, vol. 6 no. 11 (January, 2011), pp. e27462 [22087321], [doi]  [abs].
  93. Agarwal, Pankaj K.; Molhave, Thomas; Yu, Hai; Clark, James S., Exploiting Temporal Coherence in Forest Dynamics Simulation, in COMPUTATIONAL GEOMETRY (SCG 11) (2011), pp. 77-86  [abs].
  94. MORAN, E.V. and CLARK, J.S., Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data, Molecular Ecology, vol. 20 no. 6 (2011), pp. 1248--1262, Wiley Online Library .
  95. Clark, J.S. and Bell, D.M. and Hersh, M.H. and Kwit, M.C. and Moran, E. and Salk, C. and Stine, A. and Valle, D. and Zhu, K., Individual-scale variation, species-scale differences: inference needed to understand diversity, Ecology letters (2011), Blackwell Publishing Ltd .
  96. Clark, J.S. and Bell, D.M. and Hersh, M.H. and Nichols, L., Climate change vulnerability of forest biodiversity: climate and competition tracking of demographic rates, Global Change Biology, vol. 17 no. 5 (2011), pp. 1834--1849, Wiley Online Library .
  97. Luo, Y. and Ogle, K. and Tucker, C. and Fei, S. and Gao, C. and LaDeau, S. and Clark, J.S. and Schimel, D.S., Ecological forecasting and data assimilation in a data-rich era, Ecological Applications, vol. 21 no. 5 (2011), pp. 1429--1442, Eco Soc America .
  98. Agarwal, P.K. and M{\o}lhave, T. and Yu, H. and Clark, J.S., Exploiting temporal coherence in forest dynamics simulation, in Proceedings of the 27th annual ACM symposium on Computational geometry (2011), pp. 77--86 .
  99. Clark, J.S. and Agarwal, P. and Bell, D.M. and Flikkema, P.G. and Gelfand, A. and Nguyen, X. and Ward, E. and Yang, J., Inferential ecosystem models, from network data to prediction, Ecological Applications, vol. 21 no. 5 (2011), pp. 1523--1536, Eco Soc America .
  100. Colchero, F. and Clark, J.S., Bayesian inference on age-specific survival for censored and truncated data, Journal of Animal Ecology, vol. 81 no. 1 (2011), pp. 139--149, Blackwell Publishing Ltd .
  101. Valle, D. and Clark, J.S. and Zhao, K., Enhanced Understanding of Infectious Diseases by Fusing Multiple Datasets: A Case Study on Malaria in the Western Brazilian Amazon Region, PloS one, vol. 6 no. 11 (2011), pp. e27462, Public Library of Science .
  102. J.S. Clark, see CV for complete list (2011) .
  103. Luo, YQ; Ogle, K; Tucker, C; Fei, S; Gao, C; LaDeau, S; Clark, JS; Schimel, D, Data assimilation and ecological forecasting in a data-rich era, Ecological Applications, vol. 21 (2011), pp. 1429-1442 .
  104. Wu, W; Clark, JS; Vose, JM, Assimilating multi-source uncertainties of a parsimonious conceptual hydrological model using hierarchical Bayesian modeling, Journal of Hydrology, vol. 394 no. 3-4 (November, 2010), pp. 436-446, Elsevier BV [doi]  [abs].
  105. Clark, JS; Bell, D; Chu, C; Courbaud, B; Dietze, M; Hersh, M; Hillerislambers, J; Ibáñez, I; Ladeau, S; McMahon, S; Metcalf, J; Mohan, J; Moran, E; Pangle, L; Pearson, S; Salk, C; Shen, Z; Valle, D; Wyckoff, P, High-dimensional coexistence based on individual variation: A synthesis of evidence, Ecological Monographs, vol. 80 no. 4 (November, 2010), pp. 569-608, WILEY [doi]  [abs].
  106. Vieilledent, G; Courbaud, B; Kunstler, G; Dhôte, J-F; Clark, JS, Individual variability in tree allometry determines light resource allocation in forest ecosystems: a hierarchical Bayesian approach., Oecologia, vol. 163 no. 3 (July, 2010), pp. 759-773 [doi]  [abs].
  107. Way, DA; Ladeau, SL; McCarthy, HR; Clark, JS; Oren, R; Finzi, AC; Jackson, RB, Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L., Global Change Biology, vol. 16 no. 3 (March, 2010), pp. 1046-1056, WILEY [doi]  [abs].
  108. Clark, JS, Individuals and the Variation Needed for High Species Diversity in Forest Trees, Science (New York, N.Y.), vol. 327 no. 5969 (February, 2010), pp. 1129-1132, AMER ASSOC ADVANCEMENT SCIENCE [doi] .
  109. Clark, JS, Individuals and the variation needed for high species diversity in forest trees., Science (New York, N.Y.), vol. 327 no. 5969 (February, 2010), pp. 1129-1132, American Association for the Advancement of Science [20185724], [doi]  [abs].
  110. Luo, Y. and Melillo, J. and Niu, S. and Beier, C. and Clark, J.S. and CLASSEN, A.T. and Davidson, E. and Dukes, J.S. and EVANS, R. and Field, C.B. and others, Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, Global Change Biology, vol. 17 no. 2 (2010), pp. 843--854, Blackwell Publishing Ltd .
  111. Wu, W. and Clark, J.S. and Vose, J.M., Assimilating multi-source uncertainties of a parsimonious conceptual hydrological model using hierarchical Bayesian modeling, Journal of hydrology, vol. 394 no. 3 (2010), pp. 436--446, Elsevier .
  112. Clark, J.S. and Bell, D. and Chu, C. and Courbaud, B. and Dietze, M. and Hersh, M. and HilleRisLambers, J. and Ib{\'a}{\~n}ez, I. and LaDeau, S. and McMahon, S. and others, High-dimensional coexistence based on individual variation: a synthesis of evidence, Ecological Monographs, vol. 80 no. 4 (2010), pp. 569--608, Eco Soc America .
  113. Vieilledent, G. and Courbaud, B. and Kunstler, G. and Dh{\^o}te, J.F. and Clark, J.S., Individual variability in tree allometry determines light resource allocation in forest ecosystems: a hierarchical Bayesian approach, Oecologia, vol. 163 no. 3 (2010), pp. 759--773, Springer .
  114. Moran, E.V. and Willis, J. and Clark, J.S., COS 87-4: Hybridization in two mixed-species red oak populations: Implications for response to global change, The 95th ESA Annual Meeting (2010) .
  115. Clark, JS; Bell, D; Dietze, M; Hersh, M; Ibanez, I; LaDeau, S; McMahon, S; Metcalf, J; Moran, E; Pangle, L; others,, Models for demography of plant populations, The Oxford Handbook of Applied Bayesian Analysis. Oxford University Press, New York, New York, Usa (2010), pp. 431-481 .
  116. Clark, JS; Hersh, MH, Inference in incidence, infection, and impact: Co-infection of multiple hosts by multiple pathogens, Bayesian Analysis, vol. 4 no. 2 (December, 2009), pp. 337-366, Institute of Mathematical Statistics [doi]  [abs].
  117. Metcalf, CJE; McMahon, SM; Clark, JS, Overcoming data sparseness and parametric constraints in modeling of tree mortality: A new nonparametric Bayesian model, Canadian Journal of Forest Research, vol. 39 no. 9 (September, 2009), pp. 1677-1687, Canadian Science Publishing [doi]  [abs].
  118. Schick, RS; Halpin, PN; Read, AJ; Slay, CK; Kraus, SD; Mate, BR; Baumgartner, MF; Roberts, JJ; Best, BD; Good, CP; Loarie, SR; Clark, JS, Striking the right balance in right whale conservation, Canadian Journal of Fisheries and Aquatic Sciences, vol. 66 no. 9 (September, 2009), pp. 1399-1403, Canadian Science Publishing [doi]  [abs].
  119. Vieilledent, G; Courbaud, B; Kunstler, G; Dhôte, JF; Clark, JS, Biases in the estimation of size-dependent mortality models: Advantages of a semiparametric approach, Canadian Journal of Forest Research, vol. 39 no. 8 (August, 2009), pp. 1430-1443, Canadian Science Publishing [doi]  [abs].
  120. Colchero, F; Medellin, RA; Clark, JS; Lee, R; Katul, GG, Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep., The Journal of Animal Ecology, vol. 78 no. 3 (May, 2009), pp. 666-673, Wiley Online Library [19245378], [doi]  [abs].
  121. Ibáñez, I; Clark, JS; Dietze, MC, Estimating colonization potential of migrant tree species, Global Change Biology, vol. 15 no. 5 (April, 2009), pp. 1173-1188, WILEY [doi]  [abs].
  122. McMahon, SM; Dietze, MC; Hersh, MH; Moran, EV; Clark, JS, A predictive framework to understand forest responses to global change., Annals of the New York Academy of Sciences, vol. 1162 no. 1 (April, 2009), pp. 221-236, Wiley Online Library [19432650], [doi]  [abs].
  123. Cressie, N; Calder, CA; Clark, JS; Ver Hoef, JM; Wikle, CK, Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling., Ecological Applications : a Publication of the Ecological Society of America, vol. 19 no. 3 (April, 2009), pp. 553-570 [doi]  [abs].
  124. Metcalf, CJE; Clark, JS; Clark, DA, Tree growth inference and prediction when the point of measurement changes: Modelling around buttresses in tropical forests, Journal of Tropical Ecology, vol. 25 no. 1 (January, 2009), pp. 1-12, Cambridge University Press (CUP) [doi]  [abs].
  125. Clark, JS, Beyond neutral science., Trends in Ecology and Evolution, vol. 24 no. 1 (January, 2009), pp. 8-15 [19026462], [doi]  [abs].
  126. WAY, D.A. and LADEAU, S.L. and MCCARTHY, H.R. and CLARK, J.S. and OREN, RAM and FINZI, A.C. and JACKSON, R.B., Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L., Global Change Biology, vol. 16 no. 3 (2009), pp. 1046--1056, Blackwell Publishing Ltd .
  127. Cressie, N. and Calder, C.A. and Clark, J.S. and Hoef, J.M.V. and Wikle, C.K., Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling, Ecological Applications, vol. 19 no. 3 (2009), pp. 553--570, Eco Soc America .
  128. Metcalf, C.J.E. and Clark, J.S. and Clark, D.A., Tree growth inference and prediction when the point of measurement changes: modelling around buttresses in tropical forests, Journal of Tropical Ecology, vol. 25 no. 01 (2009), pp. 1--12, Cambridge Univ Press .
  129. Metcalf, C.J.E.M.C.J.E. and McMahon, S.M.M.M.S.M. and Clark, J.S.C.J.S., Overcoming data sparseness and parametric constraints in modeling of tree mortality: a new nonparametric Bayesian model, Canadian Journal of Forest Research, vol. 39 no. 9 (2009), pp. 1677--1687 .
  130. Vieilledent, G.V.G. and Courbaud, B.C.B. and Kunstler, G.K.G. and Jean-Fran{\cc}ois Dh{\^o}te, J.F.D. and Clark, J.S.C.J.S., Biases in the estimation of size-dependent mortality models: advantages of a semiparametric approach, Canadian Journal of Forest Research, vol. 39 no. 8 (2009), pp. 1430--1443, NRC Research Press .
  131. Clark, J.S., Beyond neutral science, Trends in Ecology & Evolution, vol. 24 no. 1 (2009), pp. 8--15, Elsevier .
  132. Clark, J.S., Beyond neutral science, Trends Ecol Evol no. 24 (2009), pp. 8-15 .
  133. Way, D.A., S. L. LaDeau, H. R. McCarthy, J. S. Clark, R. Oren, A. C. Finzi and R. B. Jackson, Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L, Ecological Society of America Annual Meeting (2009) .
  134. Schick, R.S., P. N. Halpin, A. J. Read, C. K. Slay, S. D. Kraus, B. R. Mate, M. F. Baumgartner, J. J. Roberts, B. D. Best, C. P. Good, S. R. Loarie, and J. S. Clark, Striking the right balance in right whale conservation, Canadian Journal of Fisheries and Aquatic Sciences (2009) .
  135. Colchero, F., R. A. Medellin, J. S. Clark, R. Lee, and G. G. Katul, Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep (2009) .
  136. Brzuszek, RF; Clark, J, Visitor perceptions of ecological design at the Crosby Arboretum, Picayune, Mississippi, Native Plants Journal, vol. 10 no. 2 (2009), pp. 91-105, University of Wisconsin Press .
  137. Ibáñez, ; I, ; Clark, ; S, J; Dietze,, Estimating performance of potential migrant species, Global Change Biology (2009) .
  138. Clark, JS; Hersh, MH, Inference when multiple pathogens affect multiple hosts: Bayesian model selection, Bayesian Analysis (2009) .
  139. Schick, RS; Loarie, SR; Colchero, F; Best, BD; Boustany, A; Conde, DA; Halpin, PN; Joppa, LN; McClellan, CM; Clark, JS, Understanding movement data and movement processes: current and emerging directions., Ecology Letters, vol. 11 no. 12 (December, 2008), pp. 1338-1350, Blackwell Publishing Ltd [19046362], [doi]  [abs].
  140. Dietze, MC; Wolosin, MS; Clark, JS, Capturing diversity and interspecific variability in allometries: A hierarchical approach, Forest Ecology and Management, vol. 256 no. 11 (November, 2008), pp. 1939-1948, Elsevier BV [doi]  [abs].
  141. Ibáñez, I; Clark, JS; Dietze, MC, Evaluating the sources of potential migrant species: implications under climate change., Ecological Applications : a Publication of the Ecological Society of America, vol. 18 no. 7 (October, 2008), pp. 1664-1678 [18839762], [doi]  [abs].
  142. Gugger, PF; McLachlan, JS; Manos, PS; Clark, JS, Inferring long-distance dispersal and topographic barriers during post-glacial colonization from the genetic structure of red maple (Acer rubrum L.) in New England, Journal of Biogeography, vol. 35 no. 9 (September, 2008), pp. 1665-1673, WILEY [doi]  [abs].
  143. Dietze, MC; Clark, JS, Changing the gap dynamics paradigm: Vegetative regeneration control on forest response tO disturbance, Ecological Monographs, vol. 78 no. 3 (August, 2008), pp. 331-347, WILEY [doi]  [abs].
  144. Power, MJ; Marlon, J; Ortiz, N; Bartlein, PJ; Harrison, SP; Mayle, FE; Ballouche, A; Bradshaw, RHW; Carcaillet, C; Cordova, C; Mooney, S; Moreno, PI; Prentice, IC; Thonicke, K; Tinner, W; Whitlock, C; Zhang, Y; Zhao, Y; Ali, AA; Anderson, RS; Beer, R; Behling, H; Briles, C; Brown, KJ; Brunelle, A; Bush, M; Camill, P; Chu, GQ; Clark, J; Colombaroli, D; Connor, S; Daniau, AL; Daniels, M; Dodson, J; Doughty, E; Edwards, ME; Finsinger, W; Foster, D; Frechette, J; Gaillard, MJ; Gavin, DG; Gobet, E; Haberle, S; Hallett, DJ; Higuera, P; Hope, G; Horn, S; Inoue, J; Kaltenrieder, P; Kennedy, L; Kong, ZC; Larsen, C; Long, CJ; Lynch, J; Lynch, EA; McGlone, M; Meeks, S; Mensing, S; Meyer, G; Minckley, T; Mohr, J; Nelson, DM; New, J; Newnham, R; Noti, R; Oswald, W; Pierce, J; Richard, PJH; Rowe, C; Sanchez Goñi, MF; Shuman, BN; Takahara, H; Toney, J; Turney, C; Urrego-Sanchez, DH; Umbanhowar, C; Vandergoes, M; Vanniere, B; Vescovi, E; Walsh, M; Wang, X; Williams, N; Wilmshurst, J; Zhang, JH, Changes in fire regimes since the last glacial maximum: An assessment based on a global synthesis and analysis of charcoal data, Climate Dynamics, vol. 30 no. 7-8 (June, 2008), pp. 887-907, Springer Nature [doi]  [abs].
  145. Hui, D; Luo, Y; Schimel, D; Clark, JS; Hasting, A; Ogle, K; Williams, M, Converting raw data into ecologically meaningful products, Eos, vol. 89 no. 5 (February, 2008), pp. 39, American Geophysical Union (AGU) [doi] .
  146. Mohan, JE; Ziska, LH; Thomas, RB; Sicher, RC; George, K; Clark, JS; Schlesinger, WH, Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2: Reply, Ecology, vol. 89 no. 2 (February, 2008), pp. 585-587, WILEY [doi] .
  147. Clark, J.S. and Wyman, R.L., Ecosystem sensitivity to climate change and complex responses (2008), Routeledge, Chapman and Hall .
  148. Dietze, M.C. and Clark, J.S., Changing the gap dynamics paradigm: vegetative regeneration control on forest response to disturbance, Ecological Monographs, vol. 78 no. 3 (2008), pp. 331--347, Eco Soc America .
  149. Gugger, P.F. and McLachlan, J.S. and Manos, P.S. and Clark, J.S., Inferring long-distance dispersal and topographic barriers during post-glacial colonization from the genetic structure of red maple (Acer rubrum L.) in New England, Journal of Biogeography, vol. 35 no. 9 (2008), pp. 1665--1673, Blackwell Publishing Ltd .
  150. Ib{\'a}{\~n}ez, I. and Clark, J.S. and Dietze, M.C., Evaluating the sources of potential migrant species: implications under climate change, Ecological Applications, vol. 18 no. 7 (2008), pp. 1664--1678, Eco Soc America .
  151. Dietze, M., M. Wolosin, J. S. Clark, Tree allometries: capturing diversity using a Hierarchical Bayes approach. Forest Ecology and Management, vol. 256 (2008), pp. 1939-1948 .
  152. Clark, J.S., D. Bell, M.l Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. McMahon, J. Metcalf, E. Moran, L. Pangle, and M. Wolosin, Models for demography of plant populations, in Handbook of Bayesian Analysis, edited by T. O'Hagan and M. West (2008), Oxford University Press (in press..) .
  153. Colchero, F., R. A. Medellin, J. S. Clark, R. Lee, and G. G. Katul, Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep, Journal of Animal Ecology no. 78 (2008), pp. 666-673 .
  154. Metcalf, C.J.E., J. S. Clark, and D. A. Clark, Tree growth inference and prediction when the point of measurement changes: modelling around buttresses in tropical forests, Journal of Tropical Ecology (2008) .
  155. Ibáñez, I., Clark, J.S. and Dietze, M., Estimating performance of potential migrant species, Global Change Biology (2008) .
  156. Poland, M; Miklius, A; Orr, T; Sutton, J; Thornber, C; Wilson, C; Hui, D; Luo, Y; Schimel, D; Clark, JS; others,, New episodes of volcanism at Kilauea Volcano, Hawaii, Eos, vol. 89 no. 5 (2008), pp. 37-38 .
  157. Power, MJ; Marlon, J; Ortiz, N; Bartlein, PJ; Harrison, SP; Mayle, FE; Ballouche, A; Bradshaw, RHW; Carcaillet, C; Cordova, C; others,, Changes in fire regimes since the Last Glacial Maximum: an assessment based on a global synthesis and analysis of charcoal data, Climate Dynamics, vol. 30 no. 7 (2008), pp. 887-907, SPRINGER [doi]  [abs].
  158. Schick, RS; Loarie, SR; Colchero, F; Best, BD; Boustany, A; Conde, DA; Halpin, PN; Joppa, LN; McClellan, CM; Clark, JS, Understanding movement data and processes: emerging techniques, Ecol Letters (2008) .
  159. Dietze, M; Clark, JS, Rethinking gap dynamics: the impact of damaged trees and sprouts, Ecol Monog no. 78 (2008), pp. 331-347 .
  160. Flikkema, PG; Agarwal, PK; Clark, JS; Ellis, C; Gelfand, A; Munagala, K; Yang, J, From data reverence to data relevance: Model-mediated wireless sensing of the physical environment, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 4487 LNCS (December, 2007), pp. 988-994, Springer  [abs].
  161. Clark, JS; Wolosin, M; Dietze, M; Ibáñez, I; LaDeau, S; Welsh, M; Kloeppel, B, Tree growth inference and prediction from diameter censuses and ring widths., Ecological Applications : a Publication of the Ecological Society of America, vol. 17 no. 7 (October, 2007), pp. 1942-1953, Ecological Society of America [17974333], [doi]  [abs].
  162. Govindarajan, S; Dietze, MC; Agarwal, PK; Clark, JS, A scalable algorithm for dispersing population, Journal of Intelligent Information Systems, vol. 29 no. 1 (August, 2007), pp. 39-61, Springer Nature [s10844-006-0030-z], [doi]  [abs].
  163. Clark, JS; Dietze, M; Chakraborty, S; Agarwal, PK; Ibanez, I; LaDeau, S; Wolosin, M, Resolving the biodiversity paradox., Ecology Letters, vol. 10 no. 8 (August, 2007), pp. 647-659 [17594418], [doi]  [abs].
  164. Mohan, JE; Clark, JS; Schlesinger, WH, Long-term CO2 enrichment of a forest ecosystem: implications for forest regeneration and succession., Ecological Applications : a Publication of the Ecological Society of America, vol. 17 no. 4 (June, 2007), pp. 1198-1212, Eco Soc America [17555228], [doi]  [abs].
  165. Ibáñez, I; Clark, JS; LaDeau, S; Hille Ris Lambers, J, Exploiting temporal variability to understand tree recruitment response to climate change, Ecological Monographs, vol. 77 no. 2 (May, 2007), pp. 163-177, WILEY [doi]  [abs].
  166. Clark, JS; Agarwal, PK, Rejoinder to Clark et al. (2007): Response to Chesson and Rees, Ecology Letters, vol. 10 no. 8 (January, 2007), pp. 661-662, WILEY [doi] .
  167. Govindarajan, S. and Dietze, M.C. and Agarwal, P.K. and Clark, J.S., A scalable algorithm for dispersing population, Journal of Intelligent Information Systems, vol. 29 no. 1 (2007), pp. 39--61, Springer .
  168. Clark, J.S. and Dietze, M. and Chakraborty, S. and Agarwal, P.K. and Ibanez, I. and LaDeau, S. and Wolosin, M., Resolving the biodiversity paradox, Ecology Letters, vol. 10 no. 8 (2007), pp. 647--659, Blackwell Publishing Ltd .
  169. Ib{\'a}{\~n}ez, I. and Clark, J.S. and LaDeau, S. and Lambers, J.H.R., Exploiting temporal variability to understand tree recruitment response to climate change, Ecological Monographs, vol. 77 no. 2 (2007), pp. 163--177 .
  170. Flikkema, P.G., P.J. K. Agarwal, J. S. Clark, C. Ellis, A. Gelfand, K. Munagala, and J. Yang, From data reverence to data relevance: Model-mediated wireless sensing of the physical environment, in ICCS 2007, Part I, LNCS 4487, edited by Y. Shi et al. (2007), pp. 988–994 .
  171. Brzuszek, RF; Clark, J, Are They Getting It?, Landscape Architecture, vol. 97 no. 5 (2007), pp. 78, ASLA AMERICAN SOCIETY OF LANDSCAPE ARCHITECTS .
  172. Clark, JS; Wolosin, M; Dietze, M; Ibanez, I; LaDeau, S; Welsh, M; Kloeppel, B, Tree growth inference and prediction from diameter censuses and ring widths. Ecological Applications, Ecol Appl, vol. 17 (2007), pp. 1942-1953 .
  173. Lewis, MA; Neubert, MG; Caswell, H; Clark, JS; Shea, K, A guide to calculating discrete-time invasion rates from data (December, 2006), pp. 169-192, Kluwer Academic Publishers [doi]  [abs].
  174. Ibáñez, I; Clark, JS; Dietze, MC; Feeley, K; Hersh, M; LaDeau, S; McBride, A; Welch, NE; Wolosin, MS, Predicting biodiversity change: outside the climate envelope, beyond the species-area curve., Ecology, vol. 87 no. 8 (August, 2006), pp. 1896-1906, Eco Soc America [16937626], [doi]  [abs].
  175. Clark, JS; Gelfand, AE, A future for models and data in environmental science., Trends in Ecology and Evolution, vol. 21 no. 7 (July, 2006), pp. 375-380, Elsevier [16815437], [doi]  [abs].
  176. Read, AF; Clark, JS, The next 20 years of ecology and evolution., Trends in Ecology and Evolution, vol. 21 no. 7 (July, 2006), pp. 354-355, Elsevier Science [doi] .
  177. Mohan, JE; Ziska, LH; Schlesinger, WH; Thomas, RB; Sicher, RC; George, K; Clark, JS, Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2., Proceedings of the National Academy of Sciences of the United States of America, vol. 103 no. 24 (June, 2006), pp. 9086-9089 [16754866], [doi]  [abs].
  178. Read, AF; Clark, JS, The past 20 years of ecology and evolution., Trends in Ecology and Evolution, vol. 21 no. 6 (June, 2006), pp. 287, Amsterdam [Netherlands]: Elsevier Science Publishers BV [(Biomedical Division)], c1986- [doi] .
  179. Ladeau, SL; Clark, JS, Pollen production by Pinus taeda growing in elevated atmospheric CO 2, Functional Ecology., vol. 20 no. 3 (June, 2006), pp. 541-547, WILEY [doi]  [abs].
  180. LaDeau, SL; Clark, JS, Elevated CO2 and tree fecundity: The role of tree size, interannual variability, and population heterogeneity, Global Change Biology, vol. 12 no. 5 (May, 2006), pp. 822-833, WILEY [doi]  [abs].
  181. Flikkema, PG; Agarwal, PK; Clark, JS; Ellis, C; Gelfand, A; Munagala, K; Yang, J, Model-driven dynamic control of embedded wireless sensor networks, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 3993 LNCS - III (January, 2006), pp. 409-416, Springer Berlin Heidelberg [doi]  [abs].
  182. Clark, J.S. and Stocks, B.J. and Richard, P.J.H., Climate implications of biomass burning since the 19th century in eastern North America, Global Change Biology, vol. 2 no. 5 (2006), pp. 433--442, Blackwell Publishing Ltd .
  183. Mohan, J.E. and Ziska, L.H. and Schlesinger, W.H. and Thomas, R.B. and Sicher, R.C. and George, K. and Clark, J.S., Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2, Proceedings of the National Academy of Sciences, vol. 103 no. 24 (2006), pp. 9086--9089, National Acad Sciences .
  184. Clark, JS; LaDeau, S, Synthesizing ecological experiments and observational data with hierarchical Bayes, Hierarchical Models of the Environment. Oxford University Press, Oxford, Uk (2006), pp. 41-58 .
  185. Clark, JS; Gelfand, AE, A future for models and data in ecology, Trends Ecol Evol no. 21 (2006), pp. 375-380 .
  186. Beckage, B; Lavine, M; Clark, JS, Survival of tree seedlings across space and time: Estimates from long-term count data, Journal of Ecology, vol. 93 no. 6 (December, 2005), pp. 1177-1184, WILEY [doi]  [abs].
  187. Brown, KJ; Clark, JS; Grimm, EC; Donovan, JJ; Mueller, PG; Hansen, BC; Stefanova, I, Fire cycles in North American interior grasslands and their relation to prairie drought., Proceedings of the National Academy of Sciences of the United States of America, vol. 102 no. 25 (June, 2005), pp. 8865-8870 (in press.) [15956200], [doi]  [abs].
  188. Beckage, B; Clark, JS, Does predation contribute to tree diversity?, Oecologia, vol. 143 no. 3 (April, 2005), pp. 458-469, Springer [doi]  [abs].
  189. Hille Ris Lambers, J; Clark, JS, The benefits of seed banking for red maple (Acer rubrum): Maximizing seedling recruitment, Canadian Journal of Forest Research, vol. 35 no. 4 (April, 2005), pp. 806-813, Canadian Science Publishing (in press.) [doi]  [abs].
  190. Lambers, JHR; Clark, JS; Lavine, M, Implications of seed banking for recruitment of southern Appalachian woody species, Ecology, vol. 86 no. 1 (January, 2005), pp. 85-95, WILEY [doi]  [abs].
  191. Wyckoff, PH; Clark, JS, Tree growth prediction using size and exposed crown area, Canadian Journal of Forest Research, vol. 35 no. 1 (January, 2005), pp. 13-20, Canadian Science Publishing [doi]  [abs].
  192. Clark, JS; Ferraz, G; Oguge, N; Hays, H; DiCostanzo, J, Hierarchical Bayes for structured, variable populations: From recapture data to life-history prediction, Ecology, vol. 86 no. 8 (January, 2005), pp. 2232-2244, WILEY (in press.) [doi]  [abs].
  193. McLachlan, JS; Clark, JS; Manos, PS, Molecular indicators of tree migration capacity under rapid climate change, Ecology, vol. 86 no. 8 (January, 2005), pp. 2088-2098, WILEY (in press.) [doi]  [abs].
  194. Clark, JS, Why environmental scientists are becoming Bayesians, Ecology Letters, vol. 8 no. 1 (January, 2005), pp. 2-14, WILEY [doi]  [abs].
  195. Brown, KJ and Clark, JS and Grimm, EC and Donovan, JJ and Mueller, PG and Hansen, BCS and Stefanova, I., Fire cycles in North American interior grasslands and their relation to prairie drought, Proceedings of the National Academy of Sciences of the United States of America, vol. 102 no. 25 (2005), pp. 8865--8870, National Acad Sciences .
  196. McLachlan, J.S. and Clark, J.S. and Manos, P.S., Molecular indicators of tree migration capacity under rapid climate change, Ecology, vol. 86 no. 8 (2005), pp. 2088--2098, Eco Soc America .
  197. Lambers, J.H.R. and Clark, J.S., The benefits of seed banking for red maple (Acer rubrum): maximizing seedling recruitment, Canadian Journal of Forest Research, vol. 35 no. 4 (2005), pp. 806--813, NRC Research Press Ottawa, Canada .
  198. Clark, J.S. and Ferraz, G. and Oguge, N. and Hays, H. and DiCostanzo, J., Hierarchical Bayes for structured, variable populations: from recapture data to life-history prediction, Ecology, vol. 86 no. 8 (2005), pp. 2232--2244, Eco Soc America .
  199. Wyckoff, P; Clark, JS, Comparing predictors of tree growth: the case for exposed canopy area, Canadian Journal of Forest Research (2005) (in press.) .
  200. Hille Ris Lambers, J; Clark, JS; Lavine, M, Seed banking in temperate forests: Implications for recruitment limitation, Ecology (2005) (in press.) .
  201. Beckage, B; Clark, JS, Do seed and seedling predation contribute to the coexistence of three co-occuring tree species?, Oecologia (2005) (in press.) .
  202. Clark, JS, Uncertainty in population growth rates calculated from demography: the hierarchical approach, Ecology, vol. 84 (2005), pp. 1370-1381 .
  203. Govindarajan, S; Dietze, M; Agarwal, PK; Clark, JS, A scalable simulator for forest dynamics, in Proceedings of the twentieth annual symposium on Computational geometry, Proceedings of the Annual Symposium on Computational Geometry (September, 2004), pp. 106-115  [abs].
  204. McLachlan, JS; Clark, JS, Reconstructing historical ranges with fossil data at continental scales, Forest Ecology and Management, vol. 197 no. 1-3 (August, 2004), pp. 139-147, Elsevier BV [doi]  [abs].
  205. Lynch, JA; Clark, JS; Stocks, BJ, Charcoal production, dispersal, and deposition from the Fort Providence experimental fire: Interpreting fire regimes from charcoal records in boreal forests, Canadian Journal of Forest Research, vol. 34 no. 8 (August, 2004), pp. 1642-1656, Canadian Science Publishing [doi]  [abs].
  206. Clark, JS, Neutral theory (communication arising): The stability of forest biodiversity, Nature, vol. 427 (March, 2004), pp. 696-697 .
  207. Clark, JS; McLachlan, JS, The stability of forest biodiversity: Commentary, Nature, vol. 427 no. 6976 (February, 2004), pp. 696-697, Springer Nature [doi] .
  208. Mohan, JE; Clark, JS; Schlesinger, WH, Genetic variation in germination, growth, and survivorship of red maple in response to subambient through elevated atmospheric CO2, Global Change Biology, vol. 10 no. 2 (February, 2004), pp. 233-247, WILEY [doi]  [abs].
  209. Clark, JS; LaDeau, S; Ibanez, I, Fecundity of trees and the colonization-competition hypothesis, Ecological Monographs, vol. 74 no. 3 (January, 2004), pp. 415-442, WILEY [doi]  [abs].
  210. Clark, JS; Bjørnstad, ON, Population time series: Process variability, observation errors, missing values, lags, and hidden states, Ecology, vol. 85 no. 11 (January, 2004), pp. 3140-3150, WILEY [doi]  [abs].
  211. Clark, J.S., Why environmental scientists are becoming Bayesians, Ecology letters, vol. 8 no. 1 (2004), pp. 2--14, Blackwell Science Ltd .
  212. Clark, J.S. and Bj{\o}rnstad, O.N., Population time series: process variability, observation errors, missing values, lags, and hidden states, Ecology, vol. 85 no. 11 (2004), pp. 3140--3150, Eco Soc America .
  213. Lynch, J.A. and Clark, J.S. and Stocks, B.J., Charcoal production, dispersal, and deposition from the Fort Providence experimental fire: interpreting fire regimes from charcoal records in boreal forests, Canadian Journal of Forest Research, vol. 34 no. 8 (2004), pp. 1642--1656, NRC Research Press .
  214. Clark, J.S. and McLachlan, J.S., Neutral theory (communication arising): The stability of forest biodiversity, Nature, vol. 427 no. 6976 (2004), pp. 696--697, Nature Publishing Group .
  215. McLachlan, J.S. and Clark, J.S., Reconstructing historical ranges with fossil data at continental scales, Forest Ecology and Management, vol. 197 no. 1 (2004), pp. 139--147, Elsevier .
  216. Clark, J.S. and LaDeau, S. and Ibanez, I., Fecundity of trees and the colonization-competition hypothesis, Ecological Monographs, vol. 74 no. 3 (2004), pp. 415--442, Eco Soc America .
  217. Mohan, J.E. and Clark, J.S. and Schlesinger, W.H., Genetic variation in germination, growth, and survivorship of red maple in response to subambient through elevated atmospheric CO2, Global Change Biology, vol. 10 no. 2 (2004), pp. 233--247, Blackwell Publishing .
  218. J.S. Clark, Reid’s Paradox: Tree migration capacity and rapid climate change, in Conservation and Global Change, edited by T. Lovejoy (2004), Yale University Press .
  219. Beckage, B; Clark, JS, Seedling survival and growth in Southern Appalachian forests: Does spatial heterogeneity maintain species diversity, Ecology, vol. 84 (July, 2003), pp. 1849-1861 .
  220. Higgins, SI; Clark, JS; Nathan, R; Hovestadt, T; Schurr, F; Fragoso, JMV; Aguiar, MR; Ribbens, E; Lavorel, S, Forecasting plant migration rates: Managing uncertainty for risk assessment, Journal of Ecology, vol. 91 no. 3 (June, 2003), pp. 341-347, WILEY [doi]  [abs].
  221. Clark, JS; McLachlan, JS, Stability of forest biodiversity., Nature, vol. 423 no. 6940 (June, 2003), pp. 635-638 [12789337], [doi]  [abs].
  222. Hille Ris Lambers, J; Clark, JS, Effects of dispersal, shrubs, and density-dependent mortality on seed and seedling distributions in temperate forests, Canadian Journal of Forest Research, vol. 33 no. 5 (May, 2003), pp. 783-795, Canadian Science Publishing [doi]  [abs].
  223. Calder, ; Lavine, KM; Mueller, P; Clark, JS, Incorporating multiple sources of stochasticity in population dynamic models, Ecology, vol. 84 (May, 2003), pp. 1395-1402 .
  224. Clark, JS, Uncertainty in ecological inference and forecasting. (Special Feature), Ecology, vol. 84 no. 6 (April, 2003), pp. 1370-1381  [abs].
  225. Clark, JS, Uncertainty in population growth rates calculated from demography: the hierarchical approach, Ecology, vol. 84 (March, 2003), pp. 1349-1360 .
  226. Lynch, JA; Bigelow, B; Clark, JS; Edwards, M; Finney, B, Spatial and temporal variation in boreal fire, Journal of Geophysical Research, vol. 108 (February, 2003), pp. 8152-8169 .
  227. Lynch, JA; Clark, JS; Bigelow, NH; Edwards, ME; Finney, BP, Geographic and temporal variations in fire history in boreal ecosystems of Alaska, Journal of Geophysical Research, vol. 108 no. 1 (January, 2003), pp. FFR 8-1 FFR 8-17  [abs].
  228. Calder, C; Lavine, M; Müller, P; Clark, JS, Incorporating multiple sources of stochasticity into dynamic population models, Ecology, vol. 84 no. 6 (January, 2003), pp. 1395-1402, WILEY [doi]  [abs].
  229. Clark, JS, Uncertainty in Ecological Inference and Forecasting, Ecology, vol. 84 no. 6 (January, 2003), pp. 1349-1350, WILEY [doi] .
  230. Beckage, B; Clark, JS, Seedling survival and growth of three forest tree species: The role of spatial heterogeneity, Ecology, vol. 84 no. 7 (January, 2003), pp. 1849-1861, WILEY [doi]  [abs].
  231. Clark, JS; Lewis, M; McLachlan, JS; HilleRisLambers, J, Estimating population spread: What can we forecast and how well?, Ecology, vol. 84 no. 8 (January, 2003), pp. 1979-1988, WILEY [doi]  [abs].
  232. Clark, JS; Mohan, J; Dietze, M; Ibanez, I, Coexistence: How to identify trophic trade-offs, Ecology, vol. 84 no. 1 (January, 2003), pp. 17-31, WILEY [doi]  [abs].
  233. Clark, JS, Uncertainty and variability in demography and population growth: A hierarchical approach, Ecology, vol. 84 no. 6 (January, 2003), pp. 1370-1381, WILEY [doi]  [abs].
  234. Higgins, SI and Clark, JS and Nathan, R. and Hovestadt, T. and Schurr, F. and Fragoso, JMV and Aguiar, MR and Ribbens, E. and Lavorel, S., Forecasting plant migration rates: managing uncertainty for risk assessment, Journal of Ecology, vol. 91 no. 3 (2003), pp. 341--347, Blackwell Science Ltd .
  235. Clark, J.S. and Lewis, M. and McLachlan, J.S. and HilleRisLambers, J., Estimating population spread: what can we forecast and how well?, Ecology, vol. 84 no. 8 (2003), pp. 1979--1988, Eco Soc America .
  236. Clark, J.S. and McLachlan, J.S. and others, Stability of forest biodiversity, Nature, vol. 423 no. 6940 (2003), pp. 635--638 .
  237. Lambers, J.H.R. and Clark, J.S., Effects of dispersal, shrubs, and density-dependent mortality on seed and seedling distributions in temperate forests, Canadian Journal of Forest Research, vol. 33 no. 5 (2003), pp. 783--795, NRC Research Press Ottawa, Canada .
  238. Clark, J.S. and Mohan, J. and Dietze, M. and Ibanez, I., Coexistence: how to identify trophic trade-offs, Ecology, vol. 84 no. 1 (2003), pp. 17--31, Eco Soc America .
  239. Clark, J.S., Uncertainty in Ecological Inference and Forecasting 1, Ecology, vol. 84 no. 6 (2003), pp. 1349--1350, Eco Soc America .
  240. Clark, JS; Bjornstad, O, Population inference from messy data: Errors, missing and hidden states, and lagged responses, Ecology (2003) .
  241. Wyckoff, PH; Clark, JS, The relationship between growth and mortality for seven co-occurring tree species in the southern Appalachian Mountains, Journal of Ecology, vol. 90 no. 4 (August, 2002), pp. 604-615, WILEY [doi]  [abs].
  242. Lefcort, H; Aguon, MQ; Bond, KA; Chapman, KR; Chaquette, R; Clark, J; Kornachuk, P; Lang, BZ; Martin, JC, Indirect effects of heavy metals on parasites may cause shifts in snail species compositions., Archives of Environmental Contamination and Toxicology, vol. 43 no. 1 (July, 2002), pp. 34-41 [doi]  [abs].
  243. Wyckoff, PH; Clark, JS, Growth and mortality for seven co-occurring tree species in the southern Appalachian Mountains: implications for future forest composition, Journal of Ecology, vol. 90 (June, 2002), pp. 604-615 .
  244. Lambers, JHR; Clark, JS; Beckage, B, Density-dependent mortality and the latitudinal gradient in species diversity., Nature, vol. 417 no. 6890 (June, 2002), pp. 732-735 [12066182], [doi]  [abs].
  245. Clark, J.S., B. Beckage, J. Hille Ris Lambers, I. Ibanez, S. LaDeau, J. MacLachlan, J. Mohan, and M. Rocca, Dispersal and plant migration, in Encyclopedia of Global Environmental Change, edited by H. Mooney and J. Canadell, vol. 3 (2002), pp. 81-93, Wiley, Chichester, England .
  246. Clark, J.S., A. M. Gill, and A. P. Kershaw, Spatial variability in fire regimes: its effects on recent and past vegetation, in Flammable Austrailia: the Fire Regimes and Biodiversity of a Continent, edited by R. A. Bradstock, J.E. Williams, and A. M. Gill (2002), pp. 125-144, Cambridge University Press, Cambridge, England .
  247. Lavine, M; Beckage, B; Clark, JS, Statistical modeling of seedling mortality, Journal of Agricultural, Biological, and Environmental Statistics, vol. 7 no. 1 (March, 2002), pp. 21-41, Springer Nature [doi]  [abs].
  248. Clark, JS; Grimm, EC; Donovan, JJ; Fritz, SC; Engstrom, DR; Almendinger, JE, Drought cycles and landscape responses to past aridity on prairies of the northern Great Plains, USA, Ecology, vol. 83 no. 3 (March, 2002), pp. 595-601, WILEY [doi]  [abs].
  249. Kershaw, A. P., Clark, J.S., A. M. gill, and D. M. D'Costa, A history of fire in Australia, in Flammable Australia: the Fire Regimes and Biodiversity of a Continent, edited by R. Bradstock and A.M. Gill (2002), Cambridge University Press, Cambridge, England. (Pages 3-25.) .
  250. Clark, J.S. and Agarwal, P. and Lavine, M., Computation and uncertainty in ecological forecasting, in Proceedings of the 2002 annual national conference on Digital government research (2002), pp. 1--1 .
  251. Lynch, J.A. and Clark, J.S., Fire and vegetation histories in the southern Appalachian Mountains: the historical importance of fire before and after European/American settlement, A report submitted to the George Washington and Jefferson National Forest, Roanoke, Virginia, USA (2002) .
  252. Lavine, M. and Beckage, B. and Clark, J.S., Statistical modeling of seedling mortality, Journal of agricultural, biological, and environmental statistics, vol. 7 no. 1 (2002), pp. 21--41, Springer .
  253. Clark, J.S. and Grimm, E.C. and Donovan, J.J. and Fritz, S.C. and Engstrom, D.R. and Almendinger, J.E., Drought cycles and landscape responses to past aridity on prairies of the northern Great Plains, USA, Ecology, vol. 83 no. 3 (2002), pp. 595--601, Eco Soc America .
  254. Lambers, J.H.R. and Clark, J.S. and Beckage, B. and others, Density-dependent mortality and the latitudinal gradient in species diversity, Nature, vol. 417 no. 6890 (2002), pp. 732--735 .
  255. Kershaw, AP; Clark, JS; Gill, AM; D’Costa, DM, A history of fire in Australia, Flammable Australia: the Fire Regimes and Biodiversity of a Continent (2002), pp. 3-25, Cambridge University Press Cambridge .
  256. Lynch, JA; Clark, JS; Bigelow, NH; Edwards, ME; Finney, BP, Geographic and temporal variations in fire history in boreal ecosystems of Alaska, Journal of Geophysical Research, vol. 107 no. D1 (2002), pp. 8152, American Geophysical Union [doi]  [abs].
  257. Camill, P; Lynch, JA; Clark, JS; Adams, JB; Jordan, B, Changes in biomass, aboveground net primary production, and peat accumulation following permafrost thaw in the boreal peatlands of Manitoba, Canada, Ecosystems, vol. 4 no. 5 (September, 2001), pp. 461-478, Springer Nature [doi]  [abs].
  258. Clark, JS; Carpenter, SR; Barber, M; Collins, S; Dobson, A; Foley, JA; Lodge, DM; Pascual, M; Pielke, R; Pizer, W; Pringle, C; Reid, WV; Rose, KA; Sala, O; Schlesinger, WH; Wall, DH; Wear, D, Ecological forecasts: an emerging imperative., Science (New York, N.Y.), vol. 293 no. 5530 (July, 2001), pp. 657-660 [11474103], [doi]  [abs].
  259. Clark, JS; Lewis, M; Horvath, L, Invasion by extremes: population spread with variation in dispersal and reproduction., The American Naturalist, vol. 157 no. 5 (May, 2001), pp. 537-554, JSTOR [18707261], [doi]  [abs].
  260. Clark, JS; Lewis, M; Horvath, L, Invasion by extremes: variation in dispersal and reproduction retards population spread, American Naturalist, vol. 157 (May, 2001), pp. 537-554 .
  261. LaDeau, SL; Clark, JS, Rising CO2 levels and the fecundity of forest trees., Science (New York, N.Y.), vol. 292 no. 5514 (April, 2001), pp. 95-98 [11292871], [doi]  [abs].
  262. Clark, JS; Grimm, EC; Lynch, J; Mueller, PG, Effects of Holocene climate change on the C4 grassland/woodland boundary in the Northern Plains, USA, Ecology, vol. 82 no. 3 (March, 2001), pp. 620-636, WILEY [Gateway.cgi], [doi]  [abs].
  263. Schlesinger, W.H., J.S. Clark, J.E. Mohan and C.D. Reid, Global environmental change: effects on biodiversity, in Research Priorities for Conservation Biology, edited by G. Orians and M. Soule (2001), pp. 175-224, Island Press .
  264. Clark, J; Horváth, L; Lewis, M, On the estimation of spread rate for a biological population, Statistics & Probability Letters, vol. 51 no. 3 (February, 2001), pp. 225-234, Elsevier BV [doi]  [abs].
  265. Clark, J.S. and M. Lavine, Bayesian statistics in ecology, in Design and Analysis of Ecological Experiments, edited by S.M. Scheiner and J. Gurevitch (2001), pp. 327–346, Oxford Univ Press, Oxford, England .
  266. Clark, J.S. and Carpenter, S.R. and Barber, M. and Collins, S. and Dobson, A. and Foley, J.A. and Lodge, D.M. and Pascual, M. and Pielke Jr, R. and Pizer, W. and others, Ecological forecasts: an emerging imperative, Science, vol. 293 no. 5530 (2001), pp. 657--660, American Association for the Advancement of Science .
  267. Clark, J. and Horv{\'a}th, L. and Lewis, M., On the estimation of spread rate for a biological population, Statistics & probability letters, vol. 51 no. 3 (2001), pp. 225--234, Elsevier .
  268. Camill, P. and Lynch, J.A. and Clark, J.S. and Adams, J.B. and Jordan, B., Changes in biomass, aboveground net primary production, and peat accumulation following permafrost thaw in the boreal peatlands of Manitoba, Canada, Ecosystems, vol. 4 no. 5 (2001), pp. 461--478, Springer .
  269. Clark, JS; Grimm, EC; Lynch, J; Mueller, PG, Effects of Holocene climate change on the C4 grassland/woodland boundary in the Northern Plains, USA, Ecology, vol. 82 no. 3 (2001), pp. 620-636, Eco Soc America  [abs].
  270. LaDeau, SL; Clark, JS, Rising CO2 levels and the fecundity of forest trees, Science, vol. 292 no. 5514 (2001), pp. 95-98, American Association for the Advancement of Science [doi]  [abs].
  271. Clark, JS; Lavine, M, Bayesian statistics: estimating plant demographic parameters, Notes (2001) .
  272. Schlesinger, WH; Clark, JS; Moban, JE; Reid, CD, Effec1s on Biodiversi1y, Conservation Biology: Research Priorities for the Next Decade (2001), pp. 175, Island Press .
  273. Camill, P; Clark, JS, Long-term perspectives on lagged ecosystem responses to climate change: Permafrost in boreal peatlands and the grassland/woodland boundary, Ecosystems, vol. 3 no. 6 (December, 2000), pp. 534-544, Springer Nature [doi]  [abs].
  274. Knoepp, JD; Coleman, DC; Crossley, DA; Clark, JS, Biological indices of soil quality: An ecosystem case study of their use, Forest Ecology and Management, vol. 138 no. 1-3 (November, 2000), pp. 357-368, Elsevier BV [doi]  [abs].
  275. Camill, P; Clark, JS, Complex long-term climate responses of North American boreal forest and savanna, Ecosystems, vol. 3 (March, 2000), pp. 534-544 .
  276. Wyckoff, PH; Clark, JS, Predicting tree mortality from diameter growth: A comparison of maximum likelihood and Bayesian approaches, Canadian Journal of Forest Research, vol. 30 no. 1 (January, 2000), pp. 156-167, Canadian Science Publishing [doi]  [abs].
  277. Beckage, B; Clark, JS; Clinton, BD; Haines, BL, A long-term study of tree seedling recruitment in southern Appalachian forests: The effects of canopy gaps and shrub understories, Canadian Journal of Forest Research, vol. 30 no. 10 (January, 2000), pp. 1617-1631, Canadian Science Publishing [doi]  [abs].
  278. Knoepp, J.D. and Coleman, D.C. and Crossley Jr, DA and Clark, J.S., Biological indices of soil quality: an ecosystem case study of their use, Forest Ecology and Management, vol. 138 no. 1 (2000), pp. 357--368, Elsevier .
  279. Beckage, B. and Clark, J.S. and Clinton, B.D. and Haines, B.L., A long-term study of tree seedling recruitment in southern Appalachian forests: the effects of canopy gaps and shrub understories, Canadian Journal of Forest Research, vol. 30 no. 10 (2000), pp. 1617--1631, NRC Research Press Ottawa, Canada .
  280. Wyckoff, P.H. and Clark, J.S., Predicting tree mortality from diameter growth: a comparison of maximum likelihood and Bayesian approaches, Canadian Journal of Forest Research, vol. 30 no. 1 (2000), pp. 156--167, NRC Research Press Ottawa, Canada .
  281. Clark, JS; Silman, M; Kern, R; Macklin, E; Hillerislambers, J, Seed dispersal near and far: Patterns across temperate and tropical forests, Ecology, vol. 80 no. 5 (January, 1999), pp. 1475-1494, WILEY [doi]  [abs].
  282. Clark, JS; Beckage, B; Camill, P; Cleveland, B; Hillerislambers, J; Lichter, J; McLachlan, J; Mohan, J; Wyckoff, P, Interpreting recruitment limitation in forests., American Journal of Botany, vol. 86 no. 1 (January, 1999), pp. 1-16 [21680341], [doi]  [abs].
  283. Clark, JS and Beckage, B. and Camill, P. and Cleveland, B. and HilleRisLambers, J. and Lichter, J. and McLachlan, J. and Mohan, J. and Wyckoff, P., Interpreting recruitment limitation in forests, American Journal of Botany, vol. 86 no. 1 (1999), pp. 1--16, Botanical Soc America .
  284. Clark, J.S. and Silman, M. and Kern, R. and Macklin, E. and HilleRisLambers, J., Seed dispersal near and far: patterns across temperate and tropical forests, Ecology, vol. 80 no. 5 (1999), pp. 1475--1494, Eco Soc America .
  285. Clark, JS, Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord., The American Naturalist, vol. 152 no. 2 (August, 1998), pp. 204-224 [18811386], [doi]  [abs].
  286. Collatz, GJ; Berry, JA; Clark, JS, Effects of climate and atmospheric CO2 partial pressure on the global distribution of C4 grasses: present, past, and future., Oecologia, vol. 114 no. 4 (May, 1998), pp. 441-454, Springer [doi]  [abs].
  287. Camill, P; Clark, JS, Climate change disequilibrium of boreal permafrost peatlands caused by local processes., The American Naturalist, vol. 151 no. 3 (March, 1998), pp. 207-222 [18811352], [doi]  [abs].
  288. Collatz, G.J., J.A. Berry, and J. S. Clark, Effects of climate and atmospheric CO2 partial pressure on the global distribution of C4 plants: past, present, and future, vol. 114 (1998), pp. 441-454 .
  289. Clark, JS; Macklin, E; Wood, L, Stages and spatial scales of recruitment limitation in southern appalachian forests, Ecological Monographs, vol. 68 no. 2 (January, 1998), pp. 213-235, WILEY [doi]  [abs].
  290. Clark, JS; Lynch, J; Stocks, BJ; Goldammer, JG, Relationships between charcoal particles in air and sediments in west-central Siberia, The Holocene, vol. 8 no. 1 (January, 1998), pp. 19-29, SAGE Publications [doi]  [abs].
  291. Clark, JS; Fastie, C; Hurtt, G; Jackson, ST; Johnson, C; King, GA; Lewis, M; Lynch, J; Pacala, S; Prentice, C; Schupp, EW; Webb, T; Wyckoff, P, Reid's paradox of rapid plant migration, Bioscience, vol. 48 no. 1 (January, 1998), pp. 13-24, Oxford University Press (OUP) [doi] .
  292. Camill, P. and Clark, J.S., Climate change disequilibrium of boreal permafrost peatlands caused by local processes, The American Naturalist, vol. 151 no. 3 (1998), pp. 207--222, JSTOR .
  293. Clark, J.S. and Fastie, C. and Hurtt, G. and Jackson, S.T. and Johnson, C. and King, G.A. and Lewis, M. and Lynch, J. and Pacala, S. and Prentice, C. and others, Reid's paradox of rapid plant migration, BioScience, vol. 48 no. 1 (1998), pp. 13--24, JSTOR .
  294. Clark, J.S. and Macklin, E. and Wood, L., Stages and spatial scales of recruitment limitation in southern Appalachian forests, Ecological Monographs, vol. 68 no. 2 (1998), pp. 213--235, Eco Soc America .
  295. Clark, J.S., Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord, The American Naturalist, vol. 152 no. 2 (1998), pp. 204--224, JSTOR .
  296. Clark, J.S. and Lynch, J. and Stocks, B.J. and Goldammer, J.G., Relationships between charcoal particles in air and sediments in west-central Siberia, The Holocene, vol. 8 no. 1 (1998), pp. 19--29, Sage Publications .
  297. Pitelka, LF; Gardner, RH; Ash, J; Berry, S; Gitay, H; Noble, IR; Saunders, A; Bradshaw, RHW; Brubaker, L; Clark, JS; Davis, MB; Sugita, S; Dyer, JM; Hengeveld, R; Hope, G; Huntley, B; King, GA; Lavorel, S; Mack, RN; Malanson, GP; McGlone, M; Prentice, IC; Rejmanek, M, Plant migration and climate change, American Scientist, vol. 85 no. 5 (September, 1997), pp. 464-473, SIGMA XI-SCI RES SOC [Gateway.cgi] .
  298. J.S. Clark, Introduction to sediment records of biomass burning and global change, in Sediment Records of Biomass Burning and Global Change, edited by J.S. Clark, H. Cachier , J.G. Goldammer, and B.J. Stocks (1997), pp. 1-9, Springer Verlag, Berlin, Germany .
  299. J.S. Clark and W. A. Patterson, Background and local charcoal in sediments: scales of fire evidence in the paleorecord., in Sediment Records of Biomass Burning and Global Change, edited by J.S. Clark, H. Cachier , J.G. Goldammer, and B.J. Stocks (1997), pp. 23-48, Springer Verlag, Berlin, Germany .
  300. Clark, JS, Facing short-term extrapolation with long-term evidence: Holocene fire in the north-eastern US forests, Journal of Ecology, vol. 85 no. 3 (January, 1997), pp. 377-380, JSTOR [doi] .
  301. Pitelka, L.F., Plant Migration and Climate Change: A more realistic portrait of plant migration is essential to predicting biological responses to global warming in a world drastically altered by human activity, American Scientist, vol. 85 no. 5 (1997), pp. 464--473, JSTOR .
  302. Clark, J.S., Facing short-term extrapolation with long-term evidence: Holocene fire in the north-eastern US forests, Journal of Ecology (1997), pp. 377--380, British Ecological Society .
  303. Clark, JS; Patterson, WA, Background and local charcoal in sediments: scales of fire evidence in the paleorecord, Nato Asi Series I Global Environmental Change, vol. 51 (1997), pp. 23-48, SPRINGER .
  304. Novakov, T; Cachier, H; Clark, JS; Gaudichet, A; Macko, S; Masclet, P, Characterization of particulate products of biomass combustion, Nato Asi Series I Global Environmental Change, vol. 51 (1997), pp. 117-144, SPRINGER .
  305. J.S. Clark, Baseline biomass burning emissions of eastern North America, in Biomass Burning and Global Change, edited by J.S. Levine (1996), pp. 750-757, MIT Press, Cambridge, Massachusetts, USA .
  306. J.S. Clark and P. J. H. Richard, The role of paleofire in boreal and other cool-coniferous forests, in Fire in Ecosystem of Boreal Eurasia, edited by J.G. Goldammer and V.V. Furyaev (1996), pp. 65-89, Kluwer, Dordrecht, The Netherlands .
  307. J.S. Clark, Terrestrial biotic responses to environmental change and feedbacks to climate, in Climate Change 1995: The Science of Climate Change, edited by J.T. Houghton, L. G. Meira Filho, B.A. Callander, N. Harris, A. Kattenberg, and K. Maskell (1996), pp. 445-482, Intergovernmental Panel on Climate Change, Cambridge University Press, Cambridge, England .
  308. J.S. Clark, Fire in ecosystems of boreal Eurasia: the Bor Forest Island Fire Experiment Fire Research Campaign Asia - North (FIRESCAN), in Biomass Burning and Global Change, edited by J.S. Levine (1996), pp. 848-873, MIT Press, Cambridge, Massachusetts, USA .
  309. Weiss, K. F., J. G. Goldammer, J. S. Clark, D. A. Livingstone, and M. O. Andreae, Reconstruction of prehistoric fire regimes in East Africa by lake sediment analysis, in Biomass Burning and Global Change, edited by J.S. Levine (1996), MIT Press, Cambridge, Massachusetts, USA .
  310. Clark, JS; Richard, PJH, The role of paleofire in boreal and other cool-coniferous forests, edited by Goldammer, JG; Furyeav, VV, Fire in Ecosystems of Boreal Eurasia, vol. 48 (January, 1996), pp. 65-89, KLUWER ACADEMIC PUBL [Gateway.cgi] .
  311. Clark, JS; Stocks, BJ; Richard, PJH, Climate implications of biomass burning since the 19th century in eastern North America, Global Change Biology, vol. 2 no. 5 (January, 1996), pp. 433-442, WILEY [doi]  [abs].
  312. Clark, JS; Daniel Royall, P; Chumbley, C, The role of fire during climate change in an eastern deciduous forest at Devil's Bathtub, New York, Ecology, vol. 77 no. 7 (January, 1996), pp. 2148-2166, WILEY [doi]  [abs].
  313. Clark, JS; Royall, PD, Local and regional sediment charcoal evidence for fire regimes in presettlement north-eastern North America, Journal of Ecology, vol. 84 no. 3 (January, 1996), pp. 365-382, JSTOR [doi]  [abs].
  314. Clark, JS; Hussey, T; Royall, PD, Presettlement analogs for quaternary fire regimes in eastern North America, Journal of Paleolimnology, vol. 16 no. 1 (January, 1996), pp. 79-96, Springer Nature [doi]  [abs].
  315. Clark, JS; Hussey, TC, Estimating the mass flux of charcoal from sedimentary records: Effects of particle size, morphology, and orientation, The Holocene, vol. 6 no. 2 (January, 1996), pp. 129-144, SAGE Publications [doi]  [abs].
  316. Clark, JS, Testing disturbance theory with long-term data: Alternative life-history solutions to the distribution of events, The American Naturalist, vol. 148 no. 6 (January, 1996), pp. 976-996, University of Chicago Press [doi]  [abs].
  317. Clark, J.S., Testing disturbance theory with long-term data: alternative life-history solutions to the distribution of events, American naturalist (1996), pp. 976--996, University of Chicago Press .
  318. Clark, J.S. and Hussey, T.C., Estimating the mass flux of charcoal from sedimentary records: effects of particle size, morphology, and orientation, The Holocene, vol. 6 no. 2 (1996), pp. 129--144, Sage Publications .
  319. Clark, J.S. and Royall, P.D., Local and regional sediment charcoal evidence for fire regimes in presettlement north-eastern North America, Journal of Ecology (1996), pp. 365--382, JSTOR .
  320. Clark, J.S. and Hussey, T. and Royall, P.D., Presettlement analogs for Quaternary fire regimes in eastern North America, Journal of Paleolimnology, vol. 16 no. 1 (1996), pp. 79--96, Springer .
  321. Clark, JS and Richard, PJH, The role of paleofire in boreal and other cool-coniferous forests, FORESTRY SCIENCES, vol. 48 (1996), pp. 65--89, KLUWER ACADEMIC PUBLISHERS .
  322. Clark, JS, Disturbance and population structure on the shifting mosaic landscape, Ecosystem Management Selected Readings. Springer, New York (1996), pp. 76-98 .
  323. Wright, H. E., and J. S. Clark, Charcoal analysis of varved lake sediments, edited by In S. Hicks, U. Miller , and M. Saarnito, Laminated Sediments and Archaeology, Journal of the European Study Group on Physical, Chemical, Mathematical and Biological Techniques Applied to Archaeology (1995), pp. 125-130, Rixensart, Belgium .
  324. Clark, JS; Royall, PD, Particle-size evidence for source areas of charcoal accumulation in late holocene sediments of eastern north american lakes, Quaternary Research, vol. 43 no. 1 (January, 1995), pp. 80-89, Cambridge University Press (CUP) [doi]  [abs].
  325. Clark, JS; Royall, PD, Transformation of a northern hardwood forest by aboriginal (Iroquois) fire: Charcoal evidence from Crawford Lake, Ontario, Canada, The Holocene, vol. 5 no. 1 (January, 1995), pp. 1-9, SAGE Publications [doi] .
  326. Clark, JS; Ji Yuan,, Fecundity and dispersal in plant populations: Implications for structure and diversity, The American Naturalist, vol. 146 no. 1 (January, 1995), pp. 72-111, University of Chicago Press [doi] .
  327. Clark, J.S. and Royall, P.D., Particle-size evidence for source areas of charcoal accumulation in late Holocene sediments of eastern North American lakes, Quaternary Research, vol. 43 no. 1 (1995), pp. 80--89, Elsevier .
  328. Clark, J.S. and Royall, P.D., Transformation of a northern hardwood forest by aboriginal (Iroquois) fire: charcoal evidence from Crawford Lake, Ontario, Canada, The Holocene, vol. 5 no. 1 (1995), pp. 1--9, Sage Publications .
  329. Clark, J.S. and Ji, Y., Fecundity and dispersal in plant populations: implications for structure and diversity, American Naturalist (1995), pp. 72--111, JSTOR .
  330. J.S. Clark, Climate and Indian effects on southern Ontario forests: forum, vol. 5 (1995), pp. 371-379 .
  331. Collatz, GJ; Clark, JS; Berry, JA, Biochemical bases for the biogeography of C3/C4 grasses and implications for changing distributions since the last glacial maximum, Bulletin of the Ecological Society of America, vol. 76 no. CONF-9507129-- (1995) .
  332. Clark, JS, Climate and Indian effects on southern Ontario forests: a reply to Campbell and McAndrews, The Holocene, vol. 5 no. 3 (1995), pp. 371-379, SAGE Publications [doi] .
  333. Clark, JS, Fire in boreal ecosystems of Eurasia: first results of the Bor Forest Island Fire Experiment, Fire Research Campaign Asia-North (FIRESCAN), Journal of World Resources Review (February, 1994), pp. 499-519 .
  334. Clark, JS; Royall, PD, Pre-industrial particulate emissions and carbon sequestration from biomass burning in North America, Biogeochemistry, vol. 24 no. 1 (January, 1994), pp. 35-51, Springer Nature [doi]  [abs].
  335. Clark, JS; Royall, PD, Pre-industrial particulate emissions and carbon sequestration from biomass burning in North America, Biogeochemistry, vol. 23 (January, 1994), pp. 1-17 .
  336. Wright, HE; Clark, JS, Charcoal analysis of varved lake sediments, Pact no. 41 (1994), pp. 125-130, Conseil de l'Europe .
  337. J.S. Clark, Sensitivity of forest communities to global climate change, in Biotic Interactions and Global Change, edited by P. Kareiva, J.G. Kingsolver, and R.B. Huey (1993), pp. 315-332, Sinauer, Sunderland, MA .
  338. J.S. Clark, Functional groups and ecological consistencies: population perspectives on regional forest dynamics, in Scaling Processes between Leaf and Landscape Levels, edited by J. Ehleringer and C. Field (1993), pp. 255-286, New York, NY .
  339. J.S. Clark and J. Robinson, Paleoecology of Fire, in Fire in the Environment: its Ecological, Climatic, and Atmospheric Chemical Importance, edited by P. Crutzen and J. Goldammer (1993), pp. 193-214, Dahlem Conference, Wiley .
  340. J.S. Clark, Fire, climate, and forest processes during the last 2000 years, in Ecology and Paleoecology of Elk Lake, edited by W.E. Dean and J.P. Bradbury (1993), pp. 295-308, Geological Society of America .
  341. J.S. Clark, Shifting mosaic population dynamics, in Patch Dynamics, S. Levin, T.M. Powell, and J.H. Steele (1993), Springer Verlag, New York, New York .
  342. Binkley, D., P. Becker-Heidman, J.S. Clark, P.J. Crutzen, P. Frost, A.M. Gill, A. Granström, F. Mack, J.–C. Menaut, R.W. Wein, and B. van Wilgren, Impacts of fires on ecosystems, in Fire in the Environment: its Ecological, Climatic, and Atmospheric Chemical importance, edited by P. Crutzen and J. Goldammer (1993), pp. 359-374, Dahlem Conference, Wiley .
  343. Clark, JS, Scale relationships in boreal forest, Trends in Ecology and Evolution, vol. 8 (February, 1993), pp. 220 .
  344. J.S. Clark and Reid, C.D., Sensitivity of unmanaged ecosystems to global change, edited by Darmstader, J. and Toman, M. A., Non-linear Responses to Global Change, Resources for the Future (1993), pp. 53-89, Washington, D.C. .
  345. Clark, JS, Fire, climate change, and forest processes during the past 2000 years, Special Paper of the Geological Society of America, vol. 276 (January, 1993), pp. 295-308, Geological Society of America [doi]  [abs].
  346. CLARK, JS; REID, CD, SENSITIVITY OF UNMANAGED ECOSYSTEMS TO GLOBAL CHANGE, edited by Darmstadter, J; Toman, MA, Assessing Surprises and Nonlinearities in Greenhouse Warming (January, 1993), pp. 53-89, RESOURCES FOR THE FUTURE INC [Gateway.cgi] .
  347. Clark, JS, Fire, climate change, and forest processes during the past 2000 years, Elk Lake, Minnesota: Evidence for Rapid Climate Change in the North Central United States, vol. 276 (January, 1993), pp. 295-308 [doi]  [abs].
  348. Clark, JS, Geological Society of America Special Paper 276 I993, Elk Lake, Minnesota: Evidence for Rapid Climate Change in the North Central United States no. 276 (1993), pp. 295, Geological Society of Amer .
  349. Clark, JS, Shifting mosaic metapopulation dynamics, Lecture Notes in Biomathematics, vol. 96 (1993), pp. 224-246, SPRINGER .
  350. Clark, JS, Scaling at the population level: Effects of species composition and population structure, Scaling Physiological Processes: Leaf to Globe (1993), pp. 255-281, Academic Press .
  351. Clark, JS; Robinson, J, Paleoecology of fire, Wiley, New York (1993), pp. 193-214 .
  352. Marquet, PA; Fortin, MJ; Pineda, J; Wallin, DO; Clark, J; Wu, Y; Bollens, S; Jacobi, CM; Holt, RD, Ecological and evolutionary consequences of patchiness: a marine--terrestrial perspective, Patch Dynamics. Springer Verlag, New York, New York, Usa (1993), pp. 277-304 .
  353. J.S. Clark, Disturbance, climate change, and forest rehabilitation, in Ecosystem Rehabilitation: Preamble to Sustained Development, edited by M. Wali (1992), pp. 165-186, SPB Academic Publishing, The Hague, Netherlands .
  354. J.S. Clark, Implications of individual plant growth for landscape patterns of age structure, net primary production, and resource availabilities, edited by D. DeAngelis and L. Gross, Populations, Communities, and Ecosystems: an Individual Perspective (1992), pp. 421-454, Chapman and Hall, New York, NY .
  355. J.S. Clark, Validating model predictions of climate and vegetation change, in Earth System Modeling, edited by D. Ojima (1992), pp. 423-440, OIES Global Change Institute, Boulder, CO .
  356. Morris, L.A., P.B. Bush, and J.S. Clark, Ecological impacts and risks associated with forest management, in Predicting Ecosystem Risk, edited by J. Cairns, B.R. Niederlehner, and D.R. Orvos (1992), pp. 153-214, Princeton Scientific Publishing Co, Princeton, NJ .
  357. Morris, LA; Bush, PB; Clark, JS, Ecological impacts and risks associated with forest management, Advances in Modern Environmental Toxicology, vol. 20 (January, 1992), pp. 153-213 .
  358. Clark, JS, Density-independent mortality, density compensation, gap formation, and self-thinning in plant populations, Theoretical Population Biology, vol. 42 no. 2 (January, 1992), pp. 172-198, Elsevier BV [doi]  [abs].
  359. Clark, J.S., Disturbance Climate Change And Forest Rehabilitation, Wali, MK (Ed.). Ecosystem Rehabilitation: Preamble To Sustainable Development, Vol. 2. Ecosystem Analysis And Synthesis. Viii+ 388P. Spb Academic Publishing Bv: The Hague, Netherlands. Illus. Maps. Paper. Isbn, vol. 90 (1992), pp. 165--186 .
  360. Clark, J.S., Density-independent mortality, density compensation, gap formation, and self-thinning in plant populations, Theoretical Population Biology, vol. 42 no. 2 (1992), pp. 172--198, Elsevier .
  361. J.S. Clark, Ecosystem sensitivity to climate change and complex responses, in Global Change and Life on Earth, edited by R. Wyman (1991), pp. 65-98, Chapman and Hall, New York, New York .
  362. Clark, JS, Forest-tree growth rates and probability of gap origin–a comment, Ecology, vol. 72 (March, 1991), pp. 1166-1169 .
  363. Clark, JS, Disturbance and tree life history on the shifting mosaic landscape, Ecology, vol. 72 no. 3 (January, 1991), pp. 1102-1118, WILEY [doi]  [abs].
  364. Clark, JS, Disturbance and population structure on the shifting mosaic landscape, Ecology, vol. 72 no. 3 (January, 1991), pp. 1119-1137, WILEY [doi]  [abs].
  365. Clark, J.S., Disturbance and population structure on the shifting mosaic landscape, Ecology (1991), pp. 1119--1137, JSTOR .
  366. Clark, J.S., Forest-tree growth rates and probability of gap origin: A comment, Ecology, vol. 72 no. 3 (1991), pp. 1166--1169, Ecological Society of America .
  367. Clark, J.S., Disturbance and population structure on the shifting mosaic landscape, Ecology (1991), pp. 1119--1137, JSTOR .
  368. Clark, JS, Landscape interactions among nitrogen mineralization, species composition, and long-term fire frequency, Biogeochemistry, vol. 11 no. 1 (September, 1990), pp. 1-22, Springer Nature [doi]  [abs].
  369. Clark, JS, Effects of 20th century climate change and fire suppression on forest production and decomposition in northwestern Minnesota, Canadian Journal of Forest Research, vol. 20 (March, 1990), pp. 219-232 .
  370. Clark, JS, Population and evolutionary consequences of being a coastal plant: long-term evidence from the North Atlantic coasts, Aquatic Science Reviews, vol. 2 (February, 1990), pp. 509-533 .
  371. Clark, JS, Twentieth-century climate change, fire suppression, and forest production and decomposition in northwestern Minnesota, Canadian Journal of Forest Research, vol. 20 no. 2 (January, 1990), pp. 219-232, Canadian Science Publishing [doi]  [abs].
  372. Clark, JS, Integration of ecological levels: individual plant growth, population mortality and ecosystem processes, Journal of Ecology, vol. 78 no. 2 (January, 1990), pp. 275-299, JSTOR [doi]  [abs].
  373. Clark, JS, Fire and climate change during the last 750 yr in northwestern Minnesota, Ecological Monographs, vol. 60 no. 2 (January, 1990), pp. 135-159, WILEY [doi]  [abs].
  374. Clark, J.S., Evaluating models of climate and forest vegetation, UCAR/Office for Interdisciplinary Earth Studies Boulder, Colorado 1992 (1990), pp. 423 .
  375. Clark, J.S., Integration of ecological levels: individual plant growth, population mortality and ecosystem processes, The Journal of Ecology (1990), pp. 275--299, JSTOR .
  376. Clark, J.S., Landscape interactions among nitrogen mineralization, species composition, and long-term fire frequency, Biogeochemistry, vol. 11 no. 1 (1990), pp. 1--22, Springer .
  377. Clark, J.S., Fire and climate change during the last 750 yr in northwestern Minnesota, Ecological Monographs, vol. 60 no. 2 (1990), pp. 135--159, Eco Soc America .
  378. Clark, JS, Water balance and fire occurrence during the last 160 years in northwestern Minnesota, Journal of Ecology, vol. 77 (April, 1989), pp. 989-1004 .
  379. J.S. Clark, Clark, J.S. 1989. Forests are for burning, Natural History, vol. 1 (1989), pp. 50-53 .
  380. Clark, JS; Merkt, J; Müller, H, Post Glacial fire, vegetation, and cultural history of the northern Alpine forelands, southwest Germany, Journal of Ecology, vol. 77 (February, 1989), pp. 897-925 .
  381. Clark, JS, Effects of long-term water balances on fire regime, north-western Minnesota, Journal of Ecology, vol. 77 no. 4 (January, 1989), pp. 989-1004, JSTOR [doi]  [abs].
  382. Clark, JS, Ecological disturbance as a renewal process: theory and application to fire history, Oikos, vol. 56 no. 1 (January, 1989), pp. 17-30, JSTOR [doi]  [abs].
  383. Clark, J.S., Ecological disturbance as a renewal process: theory and application to fire history, Oikos (1989), pp. 17--30, JSTOR .
  384. Clark, JS and Merkt, J. and Muller, H., Post-glacial fire, vegetation, and human history on the northern alpine forelands, south-western Germany, The Journal of Ecology (1989), pp. 897--925, JSTOR .
  385. Clark, JS, The forest is for burning, Natural History (1989) .
  386. Clark, JS, Particle motion and the theory of charcoal analysis: Source area, transport, deposition, and sampling, Quaternary Research, vol. 30 no. 1 (January, 1988), pp. 67-80, Cambridge University Press (CUP) [doi]  [abs].
  387. Clark, JS, Stratigraphic charcoal analysis on petrographic thin sections: Application to fire history in northwestern Minnesota, Quaternary Research, vol. 30 no. 1 (January, 1988), pp. 81-91, Cambridge University Press (CUP) [doi]  [abs].
  388. Clark, JS, Effect of climate change on fire regimes in northwestern Minnesota, Nature, vol. 334 no. 6179 (January, 1988), pp. 233-235, Springer Nature [doi]  [abs].
  389. Clark, J.S., Effect of climate change on fire regimes in northwestern Minnesota (1988), Nature Publishing Group .
  390. Clark, J.S., Particle motion and the theory of charcoal analysis: source area, transport, deposition, and sampling, Quaternary Research, vol. 30 no. 1 (1988), pp. 67--80, Elsevier .
  391. Clark, J.S., Stratigraphic charcoal analysis on petrographic thin sections: application to fire history in northwestern Minnesota, Quaternary Research, vol. 30 no. 1 (1988), pp. 81--91, Elsevier .
  392. J.S. Clark and Patterson, W.A., Dating of the organic deposits, in Geomorphic Development of Long Island’s South Shore Barriers, edited by S.P. Leatherman (1987), National Park Service Technical Report, Boston, Massachusetts .
  393. Clark, JS, Dynamism in the barrier-beach vegetation of Great South Beach, New York, Ecological Monographs, vol. 56 (May, 1986), pp. 97-126 .
  394. J.S. Clark, Late Holocene vegetation and coastal processes at a Long Island tidal marsh, vol. 74 (1986), pp. 561-578 .
  395. Clark, JS, Coastal forest tree populations in a changing environment, southeastern Long Island, New York, Ecological Monographs, vol. 56 (March, 1986), pp. 259-277 .
  396. J.S. Clark, Vegetation and land-use history of the William Floyd Estate, Fire Island National Seashore, New York (1986) (National Park Service, Office of Scientific Studies Technical Report OSS 86-3, Boston, Massachusetts.) .
  397. Clark, JS, Late- Holocene vegetation and coastal processes at a Long Island tidal marsh., Journal of Ecology, vol. 74 no. 2 (January, 1986), pp. 561-578, JSTOR [doi]  [abs].
  398. Clark, JS; Overpeck, JT; Webb, T; Patterson, WA, Pollen stratigraphic correlation and dating of barrier-beach peat sections, Review of Palaeobotany and Palynology, vol. 47 no. 1-2 (January, 1986), pp. 145-168, Elsevier BV [doi]  [abs].
  399. Clark, JS and Overpeck, JT and Webb, T. and Patterson, WA, Pollen stratigraphic correlation and dating of barrier-beach peat sections, Review of palaeobotany and palynology, vol. 47 no. 1 (1986), pp. 145--168, Elsevier .
  400. Clark, J.S., Coastal forest tree populations in a changing environment, southeastern Long Island, New York, Ecological Monographs (1986), pp. 259--277, JSTOR .
  401. Clark, JS, Dynamism in the barrier-beach vegetation of Great South Beach, New York, Ecological Monographs (1986), pp. 98-126, JSTOR .
  402. Clark, J.S. and Patterson III, W.A., The development of a tidal marsh: upland and oceanic influences, Ecological Monographs (1985), pp. 189--217, JSTOR .
  403. Clark, JS; Patterson, WA, The development of a tidal marsh: upland and oceanic influences, Ecological Monographs, vol. 55 (1985), pp. 189-217 .
  404. J.S. Clark, Chronologies for recent sediments in coastal environments, in Proceedings of the 12th Nordic Symposium on Sediments, vol. 12 (1984), pp. 76-81, Skallingen, Denmark .
  405. Clark, JS; Patterson, WA, Pollen, Pb-210, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment ( Long Island)., Journal of Sedimentary Petrology, vol. 54 no. 4 (January, 1984), pp. 1251-1265, Society for Sedimentary Geology [doi]  [abs].
  406. Clark, JS; Patterson, WA, Pollen, 210Pb, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment, Journal of Sedimentary Petrology, vol. 54 (January, 1984), pp. 1249-1263 .
  407. Clark, J.S. and Patterson III, W.A., Pollen, Pb-210, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment, Journal of Sedimentary Research, vol. 54 no. 4 (1984), Society for Sedimentary Geology .

Papers Accepted

  1. Way, D.A., S. L. LaDeau, H. R. McCarthy, J. S. Clark, R. Oren, A. C. Finzi and R. B. Jackson, Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L, Global Change Biology (2009) .
  2. Govindarajan, S., M. Dietze, P. Agarwal, and J.S. Clark, A scalable model of forest dynamics, Proceedings of the ACM Symposium on Computational Geometry (2005) (in press.) .
  3. Gelfand, A., J.S. Clark, and B. Carin, Elements of Bayesian Inference, in Applications of Computational Statistics in the Environmental Sciences: Hierarchical Bayes and MCMC Methods, edited by J.S. Clark and A. Gelfand (2005 under contract), Oxford University Press (in press.) .
  4. Lewis, M.A., Neubert, M.G., Caswell, H., Clark, J.S., and Shea, K., A guide to calculating discrete-time invasion rates from data, in Conceptual ecology and invasions biology: Reciprocal approaches to nature, edited by M.W. Cadotte, S.M. McMahon and T.Fukami (2005) (in press.) .
  5. J.S. Clark and S.L. LaDeau, Synthesizing ecological experiments and observational data with Hierarchical Bayes, in Applications of Computational Statistics in, edited by J.S. Clark and A. Gelfand (2005), Oxford University (in press.) .

Papers Submitted

  1. LaDeau, S.L. and J.S. Clark, Elevated CO2 and tree fecundity: the role of tree size, interannual variability, and population heterogeneity (in review) .
  2. Ibáñez, I., J. S. Clark, M. C. Dietze, K. Feeley, M. Hersh, S. LaDeau, A. McBride, N. E. Welch, and M. S. Wolosin, Predicting biodiversity change: Outside the climate envelope, beyond the species-area curve (in review) .
  3. Mohan, J.E., J. S. Clark, and W. H. Schlesinger, Long-term CO2 enrichment of an intact forest ecosystem: implications for temperate forest regeneration and succession (in review) .
  4. Clark, J.S, Data to ecosystem prediction: complexity, variability, and uncertainty with hierarchical Bayes (2003) .
  5. Beckage, B. and J.S. Clark, Do seed and seedling predation contribute to the coexistence of three co-occuring tree species (2003) .
  6. Hille Ris Lambers, J., J.S. Clark., and M. Lavine, Seed banking in temperate forests: Implications for recruitment limitation (2003) .
  7. Clark, J.S., G. Ferraz, and N. Oguge, Population inference from messy data: Structured, variable, and uncertain demographic change (2003)  [abs].

Books Published

  1. Clark, J.S., D. Bell, M. Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. M. McMahon, C.J.E. Metcalf, E. Moran, L. Pangle, and M. Wolosin., Models for demography of plant populations, in Handbook of Bayesian Analysis, Oxford University Press. (2010) .
  2. McMahon, S. M., M. C. Dietze, M. H. Hersh, E. V. Moran, and J. S. Clark, A Predictive Framework to Understand Forest Responses to Global Change, in Year in Ecology and Conservation Biology (2009) .
  3. Clark, J.S., D. Bell, M. Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. McMahon, J. Metcalf, E. Moran, L. Pangle, and M. Wolosin, Models for demography of plant populations, in Handbook of Bayesian Analysis (2009) .
  4. Clark, J.S., Models for ecological data: an introduction (2007), Princeton University Press Princeton, New Jersey, USA .
  5. Clark, J.S., Statistical computation for environmental sciences in R: lab manual for models for ecological data (2007), Princeton University Press .
  6. Clark, J.S. and Gelfand, A., Hierarchical modelling for the environmental sciences: statistical methods and applications (2006), Oxford University Press, USA .
  7. Clark. J.S. and A. E. Gelfand (eds), Hierarchical Modelling for the Environmental Sciences, in Oxford University Press, Oxford, England. (2006) .
  8. Clark, J.S. and Gill, A.M. and Kershaw, A.P., Spatial variability in fire regimes: its effects on recent and past vegetation (2002), Cambridge University Press, Cambridge .
  9. Clark, J.S., Sediment records of biomass burning and global change, vol. 51 (1997), Springer Verlag .

Other

  1. Clark, J.S., Climate Change, Fire Occurrence, and Forest Influences During the Last 750 Years in Northwestern Minnesota (1988) .