Publications of Patrick Charbonneau

Papers Published

  1. I Altan, P Charbonneau and EH Snell, "Computational crystallization.", Archives of biochemistry and biophysicsJuly,, 2016, 602, 12-20 [doi[abs].

  2. L Fu, W Steinhardt, H Zhao, JE Socolar and P Charbonneau, "Hard sphere packings within cylinders.", Soft matterMarch,, 2016, 12(9), 2505-2514 [doi[abs].

  3. D Fusco and P Charbonneau, "Soft matter perspective on protein crystal assembly.", Colloids and surfaces. B, BiointerfacesJanuary,, 2016, 137, 22-31 [doi[abs].

  4. L Berthier, P Charbonneau and S Yaida, "Efficient measurement of point-to-set correlations and overlap fluctuations in glass-forming liquids.", The Journal of chemical physicsJanuary,, 2016, 144(2), 024501 [doi[abs].

  5. CE Owens, CW Shields, DF Cruz, P Charbonneau and GP López, "Highly parallel acoustic assembly of microparticles into well-ordered colloidal crystallites.", Soft matterJanuary,, 2016, 12(3), 717-728 [doi[abs].

  6. R Tavarone, P Charbonneau and H Stark, "Phase ordering of zig-zag and bow-shaped hard needles in two dimensions.", The Journal of chemical physicsSeptember,, 2015, 143(11), 114505 [doi[abs].

  7. Y Jin and P Charbonneau, "Dimensional study of the dynamical arrest in a random Lorentz gas", Physical Review EApril,, 2015, 91(4), 042313 [doi[abs].

  8. P Charbonneau, EI Corwin, G Parisi and F Zamponi, "Jamming criticality revealed by removing localized buckling excitations.", Physical review lettersMarch,, 2015, 114(12), 125504 [abs].

  9. Y Yang, L Fu, C Marcoux, JE Socolar, P Charbonneau and BB Yellen, "Phase transformations in binary colloidal monolayers.", Soft matterMarch,, 2015, 11(12), 2404-2415 [doi[abs].

  10. Ye Yang, Lin Fu, Catherine Marcoux, Joshua E. S. Socolar, Patrick Charbonneau, Benjamin B. Yellen, "Martensitic Transformations in Binary Colloidal Monolayers", Soft Matter, 2015 [doi[abs].

  11. P Charbonneau, Y Jin, G Parisi and F Zamponi, "Hopping and the Stokes-Einstein relation breakdown in simple glass formers.", Proceedings of the National Academy of Sciences of the United States of AmericaOctober,, 2014, 111(42), 15025-15030 [5677], [doi[abs].

  12. P Charbonneau, J Kurchan, G Parisi, P Urbani and F Zamponi, "Exact theory of dense amorphous hard spheres in high dimension. III. The full replica symmetry breaking solution", Journal of Statistical Mechanics: Theory and Experiment, 2014, 2014(10), P10009-P10009 [2549], [doi[abs].

  13. C Marcoux, TW Byington, Z Qian, P Charbonneau and JE Socolar, "Emergence of limit-periodic order in tiling models.", Physical review. E, Statistical, nonlinear, and soft matter physicsJuly,, 2014, 90(1), 012136 [2905], [doi[abs].

  14. D Fusco and P Charbonneau, "Competition between monomeric and dimeric crystals in schematic models for globular proteins.", The journal of physical chemistry. BJuly,, 2014, 118(28), 8034-8041 [jp5011428], [doi[abs].

  15. D Fusco, TJ Barnum, AE Bruno, JR Luft, EH Snell, S Mukherjee and P Charbonneau, "Statistical analysis of crystallization database links protein physico-chemical features with crystallization mechanisms.", PloS one, 2014, 9(7), e101123 [repository], [doi[abs].

  16. P Charbonneau, J Kurchan, G Parisi, P Urbani and F Zamponi, "Fractal free energy landscapes in structural glasses.", Nature communicationsJanuary,, 2014, 5, 3725 [doi[abs].

  17. D Fusco, JJ Headd, A De Simone, J Wang and P Charbonneau, "Characterizing protein crystal contacts and their role in crystallization: rubredoxin as a case study", SOFT MATTER, 2014, 10(2), 290-302 [Gateway.cgi], [doi[abs].

  18. D Fusco and P Charbonneau, "Crystallization of asymmetric patchy models for globular proteins in solution", PHYSICAL REVIEW EJuly,, 2013, 88(1) [Gateway.cgi], [doi].

  19. B Charbonneau, P Charbonneau, Y Jin, G Parisi and F Zamponi, "Dimensional dependence of the Stokes-Einstein relation and its violation", Journal of Chemical Physics, 2013, 139(16), 164502 [6073], [doi[abs].

  20. B Charbonneau, P Charbonneau and G Tarjus, "Geometrical frustration and static correlations in hard-sphere glass formers", Journal of Chemical Physics, 2013, 138(12), 12A515 [4445], [doi[abs].

  21. P Charbonneau, EI Corwin, G Parisi and F Zamponi, "Universal microstructure and mechanical stability of jammed packings.", Phys Rev LettNovember,, 2012, 109(20), 205501 [23215504], [doi[abs].

  22. K Zhang and P Charbonneau, "[N]pT ensemble and finite-size-scaling study of the critical isostructural transition in the generalized exponential model of index 4.", Phys Rev E Stat Nonlin Soft Matter PhysOctober,, 2012, 86(4 Pt 1), 042501 [23214631], [doi[abs].

  23. P Charbonneau, A Ikeda, G Parisi and F Zamponi, "Dimensional study of the caging order parameter at the glass transition.", Proc Natl Acad Sci U S AAugust,, 2012, 109(35), 13939-13943 [22891303], [doi[abs].

  24. K Zhang and P Charbonneau, "[N]pT Monte Carlo simulations of the cluster-crystal-forming penetrable sphere model.", J Chem PhysJune,, 2012, 136(21), 214106 [22697529], [doi[abs].

  25. SM Bergin, YH Chen, AR Rathmell, P Charbonneau, ZY Li and BJ Wiley, "The effect of nanowire length and diameter on the properties of transparent, conducting nanowire films.", Nanoscale, 2012, 4(6), 1996-2004 [22349106], [doi[abs].

  26. K Zhang and P Charbonneau, "Erratum: [N]pT ensemble and finite-size-scaling study of the critical isostructural transition in the generalized exponential model of index 4", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2012, 86(6) [doi].

  27. K Zhang and P Charbonneau, "[N]pT ensemble and finite-size-scaling study of the critical isostructural transition in the generalized exponential model of index 4", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2012, 86(4), 042501 [23214631], [doi[abs].

  28. B Charbonneau, P Charbonneau and G Tarjus, "Geometrical frustration and static correlations in a simple glass former", Physical Review Letters, 2012, 108(3), 035701 [2494], [doi[abs].

  29. P Charbonneau, A Ikeda, G Parisi and F Zamponi, "Glass transition and random close packing above three dimensions.", Phys Rev LettOctober,, 2011, 107(18), 185702 [22107645], [doi[abs].

  30. K Zhang and P Charbonneau, "Monte Carlo approach for studying microphases applied to the axial next-nearest-neighbor Ising and the Ising-Coulomb models", Physical Review B - Condensed Matter and Materials Physics, 2011, 83(21), 214303 [1405], [doi[abs].

  31. K Zhang, P Charbonneau and BM Mladek, "Reentrant and isostructural transitions in a cluster-crystal former.", Phys Rev LettDecember,, 2010, 105(24), 245701 [21231534], [doi[abs].

  32. K Zhang and P Charbonneau, "Monte carlo study of the axial next-nearest-neighbor Ising model.", Phys Rev LettMay,, 2010, 104(19), 195703 [20866979], [doi[abs].

  33. P Charbonneau, A Ikeda, JA van Meel and K Miyazaki, "Numerical and theoretical study of a monodisperse hard-sphere glass former.", Phys Rev E Stat Nonlin Soft Matter PhysApril,, 2010, 81(4 Pt 1), 040501 [20481668], [doi[abs].

  34. Y Jin, P Charbonneau, S Meyer, C Song and F Zamponi, "Application of Edwards' statistical mechanics to high-dimensional jammed sphere packings", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2010, 82(5), 051126 [repository], [doi[abs].

  35. JAV Meel, B Charbonneau, A Fortini and P Charbonneau, "Hard-sphere crystallization gets rarer with increasing dimension", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2009, 80(6), 061110 [repository], [doi[abs].

  36. JAV Meel, D Frenkel and P Charbonneau, "Geometrical frustration: A study of four-dimensional hard spheres", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2009, 79(3), 030201(R) [1775], [doi[abs].

  37. P Charbonneau, C Das and D Frenkel, "Dynamical heterogeneity in a glass-forming ideal gas", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2008, 78(1), 011505 [3704], [doi[abs].

  38. BM Mladek, P Charbonneau, CN Likos, D Frenkel and G Kahl, "Multiple occupancy crystals formed by purely repulsive soft particles", Journal of Physics Condensed Matter, 2008, 20(49), 494245 [doi[abs].

  39. BM Mladek, P Charbonneau and D Frenkel, "Phase coexistence of cluster crystals: Beyond the gibbs phase rule", Physical Review Letters, 2007, 99(23), 235702 [2979], [doi[abs].

  40. P Charbonneau and DR Reichman, "Dynamical heterogeneity and nonlinear susceptibility in supercooled liquids with short-range attraction", Physical Review Letters, 2007, 99(13), 135701 [1657], [doi[abs].

  41. P Charbonneau and DR Reichman, "Systematic characterization of thermodynamic and dynamical phase behavior in systems with short-ranged attraction", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2007, 75(1), 011507 [0604428], [doi[abs].

  42. P Charbonneau and D Frenkel, "Gas-solid coexistence of adhesive spheres", Journal of Chemical Physics, 2007, 126(19), 196101 [0703378], [doi[abs].

  43. P Charbonneau and DR Reichman, "Phase behavior and far-from-equilibrium gelation in charged attractive colloids", Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 2007, 75(5), 050401(R) [0604430], [doi[abs].

  44. DR Reichman and P Charbonneau, "Mode-coupling theory", Journal of Statistical Mechanics: Theory and Experiment, 2005(5), 267-289 [0511407], [doi[abs].

  45. C Chamon, P Charbonneau, LF Cugliandolo, DR Reichman and M Sellitto, "Out-of-equilibrium dynamical fluctuations in glassy systems", Journal of Chemical Physics, 2004, 121(20), 10120-10137 [0401326], [doi[abs].

  46. CJ Barden, P Charbonneau and HFS III, "Group 13-group 16 heterocubanes [RM(μ3-E)]4 (R = H, CH3; M = Al, Ga, In; E = O, S, Se, Te) and group 13 cubanes [RM(μ3-M)]4 (R = F, Cl, CH3, NO2; M = Al, Ga, In): A structural study", Organometallics, 2002, 21(17), 3605-3609 [doi[abs].

  47. P Charbonneau, B Jean-Claude and MA Whitehead, "Synthesis of a prodrug: A semi-empirical PM3 study", Journal of Molecular Structure: THEOCHEM, 2001, 574, 85-91 [doi[abs].

  48. AC Spivey, P Charbonneau, T Fekner, DH Hochmuth, A Maddaford, C Malardier-Jugroot, AJ Redgrave and MA Whitehead, "Energy barriers to rotation in axially chiral analogues of 4-(dimethylamino)pyridine", Journal of Organic Chemistry, 2001, 66(22), 7394-7401 [doi[abs].

Papers Accepted

  1. Patrick Charbonneau, Eric I. Corwin, Giorgio Parisi, and Francesco Zamponi, "Jamming Criticality Revealed by Removing “Bucklers”", Physical Review Letters, 2015 [1411.3975v1[abs].

Papers Submitted

  1. P Charbonneau, Y Jin, G Parisi, C Rainone, B Seoane and F Zamponi, "Numerical detection of the Gardner transition in a mean-field glass former", Physical Review EJuly,, 2015, 92(1), 012316 [1501.07244], [doi[abs].

  2. Y. Jin, P. Charbonneau, "Mapping the arrest of the random Lorentz gas to the dynamical transition of simple glass formers", 2014 [0688[abs].