Duke Herbarium Lichens Database
Duke Herbarium
Arts & Sciences
Duke University

 HOME > Arts & Sciences > Duke Herbarium > Lichens    Search Help Login pdf version printable version 

Publications [#345376] of Francois M. Lutzoni

Papers Published

  1. Carbone, I; White, JB; Miadlikowska, J; Arnold, AE; Miller, MA; Magain, N; U'Ren, JM; Lutzoni, F, T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees., Microbiology Resource Announcements, vol. 8 no. 29 (July, 2019) [doi]
    (last updated on 2019/11/17)

    Abstract:
    The Tree-Based Alignment Selector (T-BAS) toolkit combines phylogenetic-based placement of DNA sequences with alignment and specimen metadata visualization tools in an integrative pipeline for analyzing microbial biodiversity. The release of T-BAS version 2.1 makes available reference phylogenies, supports multilocus sequence placements and permits uploading and downloading trees, alignments, and specimen metadata.


Duke University * Arts & Sciences * Algae * Brophytes * Fungi * Lichens * Vasculars * Reload * Login