
Joshua Socolar, Professor of Physics and CNCS: Center for nonlinear and complex systems
Prof. Socolar is interested in the principles that determine collective behavior in condensed matter and dynamical systems. His current research interests include:
 Limitperiodic structures, quasicrystals, packing problems, and tiling theory.
 Selfassembly of colloidal particles with designed interactions.
 Organization and function of complex dynamical networks, especially biological networks, but also including electronic circuits and social interaction networks;
 Mechanistic models of genetic regulatory networks;
 Contact Info:
Teaching (Fall 2015):
 PHYSICS 161D.001, FUNDAMENTALS OF PHYSICS I
Synopsis
 Physics 154, TuTh 10:20 AM11:20 AM
 PHYSICS 161D.01D, FUNDAMENTALS OF PHYSICS I
Synopsis
 Physics 154, W 01:15 PM03:15 PM
 Education:
Ph.D.  University of Pennsylvania  1987 
BA  Haverford College, Haverford, PA  1980 
 Specialties:

Nonlinear dynamics and complex systems
Theoretical condensed matter physics Biological physics
 Research Interests: Theoretical Condensed Matter Physics
Prof. Socolar is interested in the principles that determine
collective behavior in condensed matter and dynamical systems.
His current research interests include:
 Organization and function of complex dynamical networks, especially genetic regulatory networks;.
 The spatial distribution of stresses granular materials (e.g.
bins of sand, coal, pills, or grain) and jamming phenomena;
 Controlling chaos, or understanding feedback mechanisms that can stabilize otherwise unstable ordered behavior in chaotic dynamical systems;
 Quasicrystals, packing problems, and tiling theory.
 Areas of Interest:
Theoretical condensed matter physics Nonlinear dynamics and control theory Statistical mechanics in nonequilibrium systems Complex Boolean networks Genetic regulatory networks Aperiodic Tilings
 Keywords:
Algorithms • Animals • Arrhythmias, Cardiac • Biological Clocks • Biological Evolution • Biophysics • Bone and Bones • Boolean networks • Cell Cycle • Cell Differentiation • Cell Physiological Phenomena • Cell Proliferation • Computational Biology • Computer Graphics • Computer Simulation • Condensed matter • Control theory • CyclinDependent Kinases • Cyclins • Data Interpretation, Statistical • Diffusion • Disease Outbreaks • Electrophysiology • Embryo, Nonmammalian • Embryonic Development • Feedback • Feedback, Physiological • G1 Phase • Gastrula • Gene Expression • Gene Expression Regulation • Gene Expression Regulation, Developmental • Gene Expression Regulation, Fungal • Gene Regulatory Networks • Genetic regulatory networks • Granular materials • Growth • Heart • Humans • Logistic Models • Mathematical Computing • Mathematical Concepts • Membrane Potentials • Mesoderm • Models, Biological • Models, Cardiovascular • Models, Chemical • Models, Genetic • Models, Statistical • Models, Theoretical • Mutation • Myocardium • Neural Networks (Computer) • Nonlinear dynamics • Nonlinear Dynamics • Nuclear Reprogramming • Periodicity • Physical Phenomena • Physics • Plant Development • Politics • Population Dynamics • Probability • Proteome • Public Opinion • S Phase • Saccharomyces cerevisiae • Sensitivity and Specificity • Signal Processing, ComputerAssisted • Signal Transduction • Social Support • Statistics as Topic • Systems Theory • Tiling theory • Time Factors • Transcription Factors • Transcription, Genetic • Variations • Ventricular Fibrillation • Yeasts
 Current Ph.D. Students
(Former Students)
 Sargis Karapetyan
 Catherine Marcoux
 Postdocs Mentored
 Xianrui Cheng (September 01, 2012  March 01, 2013)
 Volkan Sevim (March, 2008  August, 2010)
 Bjorn Samuelsson (November, 2005  August 31, 2007)
 Recent Publications
(More Publications)
 Y Yang, L Fu, C Marcoux, JE Socolar, P Charbonneau and BB Yellen, Phase transformations in binary colloidal monolayers.,
Soft matter, vol. 11 no. 12
(March, 2015),
pp. 24042415, ISSN 1744683X [doi] [abs]
 Y. Yang, L. Fu, C. Marcoux, P. Charbonneau, J.E.S. Socolar, B. B. Yellen, Phase transformations in binary colloidal monolayers,
Soft Matter
(February, 2015) [doi] [abs]
 M. Sun, X. Cheng, and J. E. S. Socolar, Regulatory logic and pattern formation in the early sea urchin embryo.,
Journal of theoretical biology, vol. 363
(December, 2014),
pp. 8092, ISSN 00225193 [doi] [abs]
 Y. Yang, L. Fu, C. Marcoux, J. E. S. Socolar, P. Charbonneau, B. B. Yellen, Martensitic transformations in binary colloidal monolayers,
PNAS
(Submitted, October, 2014)
 Marcoux, Catherine and Byington, Travis W. and Qian, Zongjin and Charbonneau, Patrick and Socolar, Joshua E. S., Emergence of limitperiodic order in tiling models.,
Physical review. E, Statistical, nonlinear, and soft matter physics, vol. 90 no. 1
(July, 2014),
pp. 012136, American Physical Society, ISSN 15393755 [PhysRevE.90.012136], [doi] [abs]
 Selected Invited Lectures
 Autonomous Boolean modeling of gene regulatory networks, May 07, 2012, Mathematical Biosciences Institute, Ohio State U.
 Hierarchical freezing in a limitperiodic structure, October 15, 2011, Princeton Center for Theoretical Science
 Periodicity and chaos in delayed Boolean networks, July 19, 2011, ICIAM Conference, Vancouver, Canada
 Relaxation to a limitperiodic ground state, May 23, 2011, Haverford College, Haverford, PA
 Dynamics of Random Networks and Boolean Models, June 28, 2009, Mount Holyoke College, South Hadley, MA
For more information, see
Prof. Socolar's Home Page.
