Math @ Duke

Papers Published
 Randles, A; Frakes, DH; Leopold, JA, Computational Fluid Dynamics and Additive Manufacturing to Diagnose and Treat Cardiovascular Disease.,
Trends in Biotechnology, vol. 35 no. 11
(November, 2017),
pp. 10491061 [doi] [abs]
 Gounley, J; Vardhan, M; Randles, A, A computational framework to assess the influence of changes in vascular geometry on blood flow,
PASC 2017  Proceedings of the Platform for Advanced Scientific Computing Conference
(June, 2017), ISBN 9781450350624 [doi] [abs]
 Dabagh, M; Jalali, P; Butler, PJ; Randles, A; Tarbell, JM, Mechanotransmission in endothelial cells subjected to oscillatory and multidirectional shear flow.,
Journal of the Royal Society Interface, vol. 14 no. 130
(May, 2017) [doi] [abs]
 Gounley, J; Draeger, EW; Randles, A, Numerical simulation of a compound capsule in a constricted microchannel.,
Procedia Computer Science, vol. 108
(January, 2017),
pp. 175184 [doi] [abs]
 Laurence, TA; Ly, S; Fong, E; Shusteff, M; Randles, A; Gounley, J; Draeger, E, Using stroboscopic flow imaging to validate largescale computational fluid dynamics simulations,
Proceedings of SPIE, vol. 10076
(January, 2017), ISBN 9781510605930 [doi] [abs]
 Gounley, J; Chaudhury, R; Vardhan, M; Driscoll, M; Pathangey, G; Winarta, K; Ryan, J; Frakes, D; Randles, A, Does the degree of coarctation of the aorta influence wall shear stress focal heterogeneity?,
Annual International Conference of the IEEE Engineering in Medicine and Biology  Proceedings, vol. 2016
(August, 2016),
pp. 34293432, ISBN 9781457702204 [doi] [abs]
 Randles, A; Draeger, EW; Oppelstrup, T; Krauss, L; Gunnels, JA, Massively parallel models of the human circulatory system,
International Conference for High Performance Computing, Networking, Storage and Analysis, SC, vol. 1520November2015
(November, 2015), ACM, ISSN 21674329, ISBN 9781450337236 [citation.cfm], [doi] [abs]
 Randles, A; Draeger, EW; Bailey, PE, Massively parallel simulations of hemodynamics in the primary large arteries of the human vasculature,
Journal of Computational Science, vol. 9
(July, 2015),
pp. 7075, ISSN 18777503 [doi]
 Whitley, HD; Scullard, CR; Benedict, LX; Castor, JI; Randles, A; Glosli, JN; Richards, DF; Desjarlais, MP; Graziani, FR, LenardBalescu Calculations and Classical Molecular Dynamics Simulations of Electrical and Thermal Conductivities of Hydrogen Plasmas,
Contributions to Plasma Physics, vol. 55 no. 23
(February, 2015),
pp. 192202, ISSN 08631042 [doi]
 You, Y; Fu, H; Song, SL; Randles, A; Kerbyson, D; Marquez, A; Yang, G; Hoisie, A, Scaling Support Vector Machines on modern HPC platforms,
Journal of Parallel and Distributed Computing, vol. 76
(February, 2015),
pp. 1631, ISSN 07437315 [doi]
 Kale, V; Randles, A; Gropp, WD, Localityoptimized mixed static/dynamic scheduling for improving load balancing on SMPs,
ACM International Conference Proceeding Series, vol. 0912September2014
(September, 2014),
pp. 115116, ISBN 9781450328753 [doi] [abs]
 Randles, A; Kaxiras, E, Parallel in time approximation of the lattice Boltzmann method for laminar flows,
Journal of Computational Physics, vol. 270
(August, 2014),
pp. 577586, ISSN 00219991 [doi]
 Almendro, V; Cheng, YK; Randles, A; Itzkovitz, S; Marusyk, A; Ametller, E; GonzalezFarre, X; Muñoz, M; Russnes, HG; Helland, A; Rye, IH; BorresenDale, AL; Maruyama, R; van Oudenaarden, A; Dowsett, M; Jones, RL; ReisFilho, J; Gascon, P; Gönen, M; Michor, F; Polyak, K, Inference of tumor evolution during chemotherapy by computational modeling and in situ analysis of genetic and phenotypic cellular diversity.,
Cell Reports, vol. 6 no. 3
(February, 2014),
pp. 514527, ISSN 22111247 [doi] [abs]
 Randles, A; Draeger, E; Michor, F, Analysis of pressure gradient across aortic stenosis with massively parallel computational simulations,
Computing in cardiology, vol. 41 no. January
(January, 2014),
pp. 217220, ISSN 23258861 [abs]
 You, Y; Song, SL; Fu, H; Marquez, A; Dehnavi, MM; Barker, K; Cameron, KW; Randles, AP; Yang, G, MICSVM: Designing a highly efficient support vector machine for advanced modern multicore and manycore architectures,
Proceedings of the International Parallel and Distributed Processing Symposium, IPDPS
(January, 2014),
pp. 809818, ISSN 15302075, ISBN 9780769552071 [doi] [abs]
 You, Y; Fu, H; Song, SL; Randles, A; Kerbyson, D; Marquez, A; Yang, G; Hoisie, A, Scaling Support Vector Machines on modern HPC platforms,
Journal of Parallel and Distributed Computing
(2014), ISSN 07437315 [doi] [abs]
 Randles, AP; Kale, V; Hammond, J; Gropp, W; Kaxiras, E, Performance analysis of the lattice Boltzmann model beyond NavierStokes,
Proceedings  IEEE 27th International Parallel and Distributed Processing Symposium, IPDPS 2013
(October, 2013),
pp. 10631074 [doi] [abs]
 Randles, AP; Rand, DG; Lee, C; Morrisett, G; Sircar, J; Nowak, MA; Pfister, H, Massively parallel model of extended memory use in evolutionary game dynamics,
Proceedings  IEEE 27th International Parallel and Distributed Processing Symposium, IPDPS 2013
(October, 2013),
pp. 12171228 [doi] [abs]
 Keyes, DE; McInnes, LC; Woodward, C; Gropp, W; Myra, E; Pernice, M; Bell, J; Brown, J; Clo, A; Connors, J; Constantinescu, E; Estep, D; Evans, K; Farhat, C; Hakim, A; Hammond, G; Hansen, G; Hill, J; Isaac, T; Jiao, X; Jordan, K; Kaushik, D; Kaxiras, E; Koniges, A; Lee, K; Lott, A; Lu, Q; Magerlein, J; Maxwell, R; McCourt, M; Mehl, M; Pawlowski, R; Randles, AP; Reynolds, D; Rivière, B; Rüde, U; Scheibe, T; Shadid, J; Sheehan, B; Shephard, M; Siegel, A; Smith, B; Tang, X; Wilson, C; Wohlmuth, B, Multiphysics simulations,
International Journal of High Performance Computing Applications, vol. 27 no. 1
(February, 2013),
pp. 483, ISSN 10943420 [doi]
 Randles, A; Baecher, M; Pfister, H; Kaxiras, E, A Lattice Boltzmann Simulation of Hemodynamics in a PatientSpecific Aortic Coarctation Model, edited by Camara, O; Manso, T; Pop, M; Rhode, K; Sermesant, M; Young, A,
Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges: Third International Workshop, STACOM 2012, Held in Conjunction with MICCAI 2012, Nice, France, October 5, 2012, Revised Selected Papers
(2013),
pp. 1725, Springer Berlin Heidelberg [9783642369612_3], [doi]
 Randles, AP, Massively parallel model of evolutionary game dynamics,
Proceedings  2012 SC Companion: High Performance Computing, Networking Storage and Analysis, SCC 2012
(December, 2012),
pp. 1531 [doi] [abs]
 Randles, A; Baecher, M; Pfister, H; Kaxiras, EK, A Lattice Boltzmann Simulation of
Hemodynamics in a PatientSpeci c Aortic Coarctation Model, edited by Camara, O; Pop, M; Mansi, T; Sermesant, M; Young, A,
Statistical Atlases and Computational Models of the Heart: Imaging and Modelling Challenges:, vol. 7746
(October, 2012),
pp. 1725 [doi] [abs]
 Borkin, MA; Gajos, KZ; Peters, A; Mitsouras, D; Melchionna, S; Rybicki, FJ; Feldman, CL; Pfister, H, Evaluation of artery visualizations for heart disease diagnosis.,
IEEE Transactions on Visualization and Computer Graphics, vol. 17 no. 12
(December, 2011),
pp. 24792488, ISSN 10772626 [doi] [abs]
 Randles, A; Zeger, L, Efficient Resource Allocation for Broadcasting MultiSlot Messages With Random Access with Capture
(October, 2011), IEEE [available here]
 Robson, B; Li, J; Dettinger, R; Peters, A; Boyer, SK, Drug discovery using very large numbers of patents. General strategy with extensive use of match and edit operations,
Journal of ComputerAided Molecular Design, vol. 25 no. 5
(May, 2011),
pp. 427441, ISSN 0920654X [doi]
 Randles, A; Melchionna, S; Kaxiras, E; Latt, J; Sircar, J; Bernaschi, M; Bisson, M; Succi, S, Multiscale simulation of cardiovascular flows on the IBM Bluegene/P: full heartcirculation system at redblood cell resolution
(November, 2010), ACM IEEE
 Jiang, K; Thorsen, O; Peters, A; Smith, B; Sosa, CP, An Efficient Parallel Implementation of the Hidden Markov Methods for Genomic SequenceSearch on a Massively Parallel System,
IEEE Transactions on Parallel and Distributed Systems, vol. 19 no. 1
(January, 2008),
pp. 1523, ISSN 10459219 [doi]
 Pang, YP; Mullins, TJ; Swartz, BA; McAllister, JS; Smith, BE; Archer, CJ; Musselman, RG; Peters, AE; Wallenfelt, BP; Pinnow, KW, EUDOC on the IBM Blue Gene/L system: Accelerating the transfer of drug discoveries from laboratory to patient,
IBM Journal of Research and Development, vol. 52 no. 1.2
(January, 2008),
pp. 6981, ISSN 00188646 [doi]
 Randles, A, Parallel Genomic SequenceSearch on a Massively Parallel System, edited by Thorsen, O; Jiang, K; Smith, B; Lin, H; Feng, W; Sosa, CP
(May, 2007), ACM


dept@math.duke.edu
ph: 919.660.2800
fax: 919.660.2821
 
Mathematics Department
Duke University, Box 90320
Durham, NC 277080320

