Publications [#353261] of Woojin Kim

Papers Published

1. Cai, C; Kim, W; Memoli, F; Wang, Y, Elder-rule-staircodes for augmented metric spaces, Siam Journal on Applied Algebra and Geometry, vol. 5 no. 3 (January, 2021), pp. 417-454, ISBN 9783959771436 [doi]
   (last updated on 2023/07/05)

   Abstract:
   An augmented metric space is a metric space (X, dX) equipped with a function fX : X \rightarrow \BbbR . This type of data arises commonly in practice, e.g., a point cloud X in \BbbR D where each point x \in X has a density function value fX(x) associated to it. An augmented metric space (X, dX, fX) naturally gives rise to a 2-parameter filtration \scrK . However, the resulting 2-parameter persistent homology H\bullet (\scrK ) could still be of wild representation type and may not have simple indecomposables. In this paper, motivated by the elder-rule for the zeroth homology of 1-parameter filtration, we propose a barcode-like summary, called the elder-rule-staircode, as a way to encode H0(\scrK ). Specifically, if n = | X| , the elder-rule-staircode consists of n number of staircase-like blocks in the plane. We show that if H0(\scrK ) is interval decomposable, then the barcode of H0(\scrK ) is equal to the elder-rule-staircode. Furthermore, regardless of the interval decomposability, the fibered barcode, the dimension function (a.k.a. the Hilbert function), and the graded Betti numbers of H0(\scrK ) can all be efficiently computed once the elder-rule-staircode is given. Finally, we develop and implement an efficient algorithm to compute the elder-rule-staircode in O(n2 log n) time, which can be improved to O(n2\alpha (n)) if X is from a fixed dimensional Euclidean space \BbbR D, where \alpha (n) is the inverse Ackermann function.