Publications of Mark E. Borsuk :recent first alphabetical combined bibtex listing:
Papers Published
- Borsuk, M. "Bayesian parameter estimation in a mixed-order model of BOD decay." Water Research 34.6 (April, 2000): 1830-1836. [doi]
- Qian, SS; Borsuk, ME; Stow, CA. "Seasonal and Long-Term Nutrient Trend Decomposition along a Spatial Gradient in the Neuse River Watershed." Environmental Science & Technology 34.21 (November, 2000): 4474-4482. [doi]
- Borsuk, M; Clemen, R; Maguire, L; Reckhow, K. "Stakeholder Values and Scientific Modeling in the Neuse River Watershed." Group Decision and Negotiation 10.4 (2001): 355-373. [doi] [abs]
- Borsuk, ME; Stow, CA; Luettich, RA; Paerl, HW; Pinckney, JL. "Modelling Oxygen Dynamics in an Intermittently Stratified Estuary: Estimation of Process Rates Using Field Data." Estuarine, Coastal and Shelf Science 52.1 (January, 2001): 33-49. [doi] [abs]
- Stow, CA; Borsuk, ME; Stanley, DW. "Long-term changes in watershed nutrient inputs and riverine exports in the Neuse River, North Carolina.." Water Research 35.6 (April, 2001): 1489-1499. [doi] [abs]
- Borsuk, ME; Higdon, D; Stow, CA; Reckhow, KH. "A Bayesian hierarchical model to predict benthic oxygen demand from organic matter loading in estuaries and coastal zones." Ecological Modelling 143.3 (September, 2001): 165-181. [doi]
- Borsuk, ME; Stow, CA; Reckhow, KH. "Predicting the frequency of water quality standard violations: a probabilistic approach for TMDL development.." Environmental Science & Technology 36.10 (May, 2002): 2109-2115. [doi] [abs]
- Borsuk, ME; Powers, SP; Peterson, CH. "A survival model of the effects of bottom-water hypoxia on the population density of an estuarine clam ( Macoma balthica )." Canadian Journal of Fisheries and Aquatic Sciences 59.8 (August, 2002): 1266-1274. [doi]
- Borsuk, ME; Stow, CA; Reckhow, KH. "Integrated approach to total maximum daily load development for Neuse River Estuary using Bayesian probability network model (Neu-BERN)." Journal of Water Resources Planning and Management 129.4 (2003): 271-282. [doi]
- Stow, CA; Roessler, C; Borsuk, ME; Bowen, JD; Reckhow, KH. "Comparison of estuarine water quality models for total maximum daily load development in Neuse River Estuary." Journal of Water Resources Planning and Management 129.4 (2003): 307-314. [doi]
- Stow, CA; Borsuk, ME. "Enhancing causal assessment of estuarine fishkills using graphical models." Ecosystems 6.1 (January, 2003): 11-19. [doi] [abs]
- Qian, SS; Stow, CA; Borsuk, ME. "On Monte Carlo methods for Bayesian inference." Ecological Modelling 159.2-3 (January, 2003): 269-277. [doi]
- Stow, CA; Borsuk, ME. "Assessing TMDL effectiveness using flow-adjusted concentrations: a case study of the Neuse River, North Carolina.." Environmental Science & Technology 37.10 (May, 2003): 2043-2050. [doi] [abs]
- Borsuk, ME. "Predictive Assessment of Fish Health and Fish Kills in the Neuse River Estuary Using Elicited Expert Judgment." Human and Ecological Risk Assessment 10.2 (April, 2004): 415-434. [doi]
- Borsuk, ME; Stow, CA; Reckhow, KH. "A Bayesian network of eutrophication models for synthesis, prediction, and uncertainty analysis." Ecological Modelling 173.2-3 (April, 2004): 219-239. [doi]
- Borsuk, ME; Stow, CA; Reckhow, KH. "Confounding effect of flow on estuarine response to nitrogen loading." Journal of Environmental Engineering 130.6 (June, 2004): 605-614. [doi]
- Borsuk, ME; Tomassini, L. "Uncertainty, imprecision, and the precautionary principle in climate change assessment.." Water Science and Technology 52.6 (January, 2005): 213-225. [abs]
- Rieckermann, J; Borsuk, M; Reichert, P; Gujer, W. "A novel tracer method for estimating sewer exfiltration." Water Resources Research 41.5 (May, 2005): n/a-n/a. [doi]
- REICHERT, P; BORSUK, M. "Does high forecast uncertainty preclude effective decision support?." Environmental Modelling & Software 20.8 (August, 2005): 991-1001. [doi]
- Rieckermann, J; Borsuk, ME; Gujer, W. "Using decision analysis to determine optimal experimental design for monitoring sewer exfiltration with tracers.." Water Science and Technology 54.6-7 (January, 2006): 161-168. [abs]
- Borsuk, ME; Reichert, P; Peter, A; Schager, E; Burkhardt-Holm, P. "Assessing the decline of brown trout (Salmo trutta) in Swiss rivers using a Bayesian probability network." Ecological Modelling 192.1-2 (February, 2006): 224-244. [doi]
- Reichert, P; Borsuk, M; Hostmann, M; Schweizer, S; Spörri, C; Tockner, K; Truffer, B. "Concepts of decision support for river rehabilitation." Environmental Modelling & Software 22.2 (February, 2007): 188-201. [doi]
- Schweizer, S; Borsuk, ME; Reichert, P. "Predicting the morphological and hydraulic consequences of river rehabilitation." River Research and Applications 23.3 (March, 2007): 303-322. [doi]
- Schweizer, S; Borsuk, ME; Jowett, I; Reichert, P. "Predicting joint frequency distributions of depth and velocity for instream habitat assessment." River Research and Applications 23.3 (March, 2007): 287-302. [doi]
- Fenner, K; Lanz, VA; Scheringer, M; Borsuk, ME. "Relating atrazine degradation rate in soil to environmental conditions: implications for global fate modeling.." Environmental Science & Technology 41.8 (April, 2007): 2840-2846. [doi] [abs]
- Tomassini, L; Reichert, P; Knutti, R; Stocker, TF; Borsuk, ME. "Robust Bayesian Uncertainty Analysis of Climate System Properties Using Markov Chain Monte Carlo Methods." Journal of Climate 20.7 (April, 2007): 1239-1254. [doi]
- Spörri, C; Borsuk, M; Peters, I; Reichert, P. "The economic impacts of river rehabilitation: A regional Input–Output analysis." Ecological Economics 62.2 (April, 2007): 341-351. [doi]
- Schweizer, S; Borsuk, ME; Reichert, P. "Erratum: Predicting the morphological and hydraulic consequences of river rehabilitation." River Research and Applications 23.7 (September, 2007): 799-799. [doi]
- Stow, CA; Reckhow, KH; Qian, SS; III, LEC; Arhonditsis, GB; Borsuk, ME; Seo, D. "Approaches to evaluate water quality model parameter uncertainty for adaptive tmdl implementation." Journal of the American Water Resources Association 43.6 (December, 2007): 1499-1507. [doi]
- Borsuk, ME; Maurer, M; Lienert, J; Larsen, TA. "Charting a path for innovative toilet technology using multicriteria decision analysis.." Environmental Science & Technology 42.6 (March, 2008): 1855-1862. [doi] [abs]
- Mieleitner, J; Borsuk, M; Bürgi, H-R; Reichert, P. "Identifying functional groups of phytoplankton using data from three lakes of different trophic state." Aquatic Sciences 70.1 (April, 2008): 30-46. [doi]
- Burkhardt-Holm, P; Segner, H; Burki, R; Peter, A; Schubert, S; Suter, MJ-F; Borsuk, ME. "Estrogenic Endocrine Disruption in Switzerland: Assessment of Fish Exposure and Effects." Chimia 62.5 (May, 2008): 376-382. [doi]
- Gronewold, AD; Borsuk, ME; Wolpert, RL; Reckhow, KH. "An assessment of fecal indicator bacteria-based water quality standards.." Environmental Science & Technology 42.13 (July, 2008): 4676-4682. [doi] [abs]
- Borsuk, ME; Schweizer, S; Reichert, P. "Addressing stakeholder concerns using the Integrative River Rehabilitation Model (IRRM)." Proc. iEMSs 4th Biennial Meeting - Int. Congress on Environmental Modelling and Software: Integrating Sciences and Information Technology for Environmental Assessment and Decision Making, iEMSs 2008 2 (December, 2008): 842-849. [abs]
- Gronewold, AD; Borsuk, ME. "A software tool for translating deterministic model results into probabilistic assessments of water quality standard compliance." Environmental Modelling & Software 24.10 (October, 2009): 1257-1262. [doi]
- Tomassini, L; Reichert, P; Künsch, HR; Buser, C; Knutti, R; Borsuk, ME. "A smoothing algorithm for estimating stochastic, continuous time model parameters and its application to a simple climate model." Journal of the Royal Statistical Society: Series C (Applied Statistics) 58.5 (December, 2009): 679-704. [doi]
- Wullschleger, SD; Davis, EB; Borsuk, ME; Gunderson, CA; Lynd, LR. "Biomass Production in Switchgrass across the United States: Database Description and Determinants of Yield." Agronomy journal 102.4 (2010): 1158-1158. [doi]
- Turaga, RMR; Howarth, RB; Borsuk, ME. "Pro-environmental behavior: rational choice meets moral motivation.." Annals of the New York Academy of Sciences 1185 (January, 2010): 211-224. [doi] [abs]
- Gerst, MD; Howarth, RB; Borsuk, ME. "Accounting for the risk of extreme outcomes in an integrated assessment of climate change." Energy Policy 38.8 (August, 2010): 4540-4548. [doi]
- Rieckermann, J; Borsuk, ME; Sydler, D; Gujer, W; Reichert, P. "Bayesian experimental design of tracer studies to monitor wastewater leakage from sewer networks." Water Resources Research 46.8 (August, 2010): n/a-n/a. [doi]
- Nair, DR; D'Ausilio, CA; Occhipinti, P; Borsuk, ME; Gladfelter, AS. "A conserved G₁ regulatory circuit promotes asynchronous behavior of nuclei sharing a common cytoplasm.." Cell Cycle 9.18 (September, 2010): 3771-3779. [doi] [abs]
- Gronewold, AD; Borsuk, ME. "Improving water quality assessments through a hierarchical Bayesian analysis of variability.." Environmental Science & Technology 44.20 (October, 2010): 7858-7864. [doi] [abs]
- Ding, P; Hoyle, CES; Borsuk, ME. "Parameter optimization and Bayesian inference in an estuarine eutrophication model of intermediate complexity." Modelling for Environment's Sake: Proceedings of the 5th Biennial Conference of the International Environmental Modelling and Software Society, iEMSs 2010 2 (December, 2010): 1745-1752. [abs]
- Tomassini, L; Knutti, R; Plattner, G-K; van Vuuren, DP; Stocker, TF; Howarth, RB; Borsuk, ME. "Uncertainty and risk in climate projections for the 21st century: comparing mitigation to non-intervention scenarios." Climatic Change 103.3-4 (December, 2010): 399-422. [doi]
- Rinderknecht, SL; Borsuk, ME; Reichert, P. "Eliciting density ratio classes." International Journal of Approximate Reasoning 52.6 (September, 2011): 792-804. [doi]
- Jakeman, A; Rizzoli, A; Voinov, A; Athanasiadis, I; Berger, T; Borsuk, M; Donatelli, M; Guariso, G; Jolma, A; Marsili-Libelli, S; Robson, B; Sànchez-Marrè, M; Seppelt, R; Swayne, D. "Best Paper Awards for 2010." Environmental Modelling & Software 26.12 (December, 2011): 1375-1375. [doi]
- Borsuk, ME; Schweizer, S; Reichert, P. "A Bayesian network model for integrative river rehabilitation planning and management.." Integrated Environmental Assessment and Management 8.3 (July, 2012): 462-472. [doi] [abs]
- Barton, DN; Kuikka, S; Varis, O; Uusitalo, L; Henriksen, HJ; Borsuk, M; de la Hera, A; Farmani, R; Johnson, S; Linnell, JDC. "Bayesian networks in environmental and resource management.." Integrated Environmental Assessment and Management 8.3 (July, 2012): 418-429. [doi] [abs]
- Rinderknecht, SL; Borsuk, ME; Reichert, P. "Bridging uncertain and ambiguous knowledge with imprecise probabilities." Environmental Modelling & Software 36 (October, 2012): 122-130. [doi]
- Ding, P; Gerst, MD; Bernstein, A; Howarth, RB; Borsuk, ME. "Rare disasters and risk attitudes: international differences and implications for integrated assessment modeling.." Risk Analysis 32.11 (November, 2012): 1846-1855. [doi] [abs]
- Gerst, MD; Wang, P; Roventini, A; Dosi, G; Howarth, RB; Borsuk, ME. "Integrated assessment of mitigation strategies using an agent-based model of the linked energy, economic, and climate system." iEMSs 2012 - Managing Resources of a Limited Planet: Proceedings of the 6th Biennial Meeting of the International Environmental Modelling and Software Society (December, 2012): 893-900. [abs]
- Gerst, MD; Ding, P; Howarth, RB; Borsuk, ME. "A possible integration of multiple paradigms used in integrated assessment modelling of climate change." iEMSs 2012 - Managing Resources of a Limited Planet: Proceedings of the 6th Biennial Meeting of the International Environmental Modelling and Software Society (December, 2012): 1343-1350. [abs]
- Gui, J; Tosteson, TD; Borsuk, M. "Weighted multiple testing procedures for genomic studies." BioData Mining 5.1 (December, 2012). [doi]
- Gerst, MD; Howarth, RB; Borsuk, ME. "The interplay between risk attitudes and low probability, high cost outcomes in climate policy analysis." Environmental Modelling & Software 41 (March, 2013): 176-184. [doi]
- Nair, A; Thomas, AC; Borsuk, ME. "Interannual variability in the timing of New England shellfish toxicity and relationships to environmental forcing.." Science of the Total Environment 447 (March, 2013): 255-266. [doi] [abs]
- Su, C; Andrew, A; Karagas, MR; Borsuk, ME. "Using Bayesian networks to discover relations between genes, environment, and disease.." BioData Mining 6.1 (March, 2013): 6. [doi] [abs]
- Giupponi, C; Borsuk, ME; de Vries, BJM; Hasselmann, K. "Innovative approaches to integrated global change modelling." Environmental Modelling & Software 44 (June, 2013): 1-9. [doi]
- Gerst, MD; Wang, P; Borsuk, ME. "Discovering plausible energy and economic futures under global change using multidimensional scenario discovery." Environmental Modelling & Software 44 (June, 2013): 76-86. [doi]
- Gerst, MD; Wang, P; Roventini, A; Fagiolo, G; Dosi, G; Howarth, RB; Borsuk, ME. "Agent-based modeling of climate policy: An introduction to the ENGAGE multi-level model framework." Environmental Modelling & Software 44 (June, 2013): 62-75. [doi]
- Lee, C; Zhang, H; Baker, AE; Occhipinti, P; Borsuk, ME; Gladfelter, AS. "Protein aggregation behavior regulates cyclin transcript localization and cell-cycle control.." Developmental Cell 25.6 (June, 2013): 572-584. [doi] [abs]
- Kelly (Letcher), RA; Jakeman, AJ; Barreteau, O; Borsuk, ME; ElSawah, S; Hamilton, SH; Henriksen, HJ; Kuikka, S; Maier, HR; Rizzoli, AE; van Delden, H; Voinov, AA. "Selecting among five common modelling approaches for integrated environmental assessment and management." Environmental Modelling & Software 47 (September, 2013): 159-181. [doi]
- Anderson, CA; Eser, U; Korndorf, T; Borsuk, ME; Skotheim, JM; Gladfelter, AS. "Nuclear repulsion enables division autonomy in a single cytoplasm.." Current Biology 23.20 (October, 2013): 1999-2010. [doi] [abs]
- Wang, P; Gerst, MD; Borsuk, ME. "Exploring energy and economic futures using agent-based modeling and scenario discovery." Understanding complex systems (December, 2013): 251-269. [doi] [abs]
- Su, C; Borsuk, ME; Andrew, A; Karagas, M. "Incorporating prior expert knowledge in learning Bayesian networks from genetic epidemiological data." 2014 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2014 (January, 2014). [doi] [abs]
- Chen, CY; Borsuk, ME; Bugge, DM; Hollweg, T; Balcom, PH; Ward, DM; Williams, J; Mason, RP. "Benthic and pelagic pathways of methylmercury bioaccumulation in estuarine food webs of the northeast United States.." PloS one 9.2 (January, 2014): e89305. [doi] [abs]
- Howarth, RB; Gerst, MD; Borsuk, ME. "Risk mitigation and the social cost of carbon." Global Environmental Change 24 (January, 2014): 123-131. [doi]
- Turaga, RMR; Howarth, RB; Borsuk, ME. "Perceptions of Mercury Risk and Its Management." Human and Ecological Risk Assessment 20.5 (September, 2014): 1385-1405. [doi]
- Rinderknecht, SL; Albert, C; Borsuk, ME; Schuwirth, N; Künsch, HR; Reichert, P. "The effect of ambiguous prior knowledge on Bayesian model parameter inference and prediction." Environmental Modelling & Software 62 (December, 2014): 300-315. [doi]
- Andrew, AS; Gui, J; Hu, T; Wyszynski, A; Marsit, CJ; Kelsey, KT; Schned, AR; Tanyos, SA; Pendleton, EM; Ekstrom, RM; Li, Z; Zens, MS; Borsuk, M; Moore, JH; Karagas, MR. "Genetic polymorphisms modify bladder cancer recurrence and survival in a USA population-based prognostic study.." Bju International 115.2 (February, 2015): 238-247. [doi] [abs]
- Ding, P; Gerst, MD; Bang, G; Borsuk, ME. "An Application of Automated Mediation to International Climate Treaty Negotiation." Group Decision and Negotiation 24.5 (September, 2015): 885-903. [doi]
- Paul, MP; Rigrod, P; Wingate, S; Borsuk, ME. "A Community-Driven Intervention in Tuftonboro, New Hampshire, Succeeds in Altering Water Testing Behavior.." Journal of environmental health 78.5 (December, 2015): 30-39. [abs]
- Lutz, DA; Burakowski, EA; Murphy, MB; Borsuk, ME; Niemiec, RM; Howarth, RB. "Trade-offs between three forest ecosystem services across the state of New Hampshire, USA: timber, carbon, and albedo.." Ecological Applications 26.1 (January, 2016): 146-161. [doi] [abs]
- Su, C; Borsuk, ME. "Improving structure MCMC for Bayesian networks through Markov Blanket resampling." Journal of machine learning research : JMLR 17 (April, 2016): 1-20. [abs]
- Mallampalli, VR; Mavrommati, G; Thompson, J; Duveneck, M; Meyer, S; Ligmann-Zielinska, A; Druschke, CG; Hychka, K; Kenney, MA; Kok, K; Borsuk, ME. "Methods for translating narrative scenarios into quantitative assessments of land use change." Environmental Modelling & Software 82 (August, 2016): 7-20. [doi]
- Mavrommati, G; Bithas, K; Borsuk, ME; Howarth, RB. "Integration of ecological-biological thresholds in conservation decision making.." Conservation Biology 30.6 (December, 2016): 1173-1181. [doi] [abs]