Publications of David F. Anderson    :chronological  alphabetical  combined listing:

%% Papers Published   
@article{fds47856,
   Author = {H. Frederik Nijhout and Michael C. Reed and David F. Anderson and Jonathan C. Mattingly and S. Jill james and Cornelia M.
             Ulrich},
   Title = {Long-Range Allosteric Interactions between the Folate and
             Methionine Cycles Stabilize DNA Methylation Reaction
             Rate},
   Journal = {Epigenetics},
   Volume = {1},
   Number = {2},
   Pages = {81-87},
   Year = {2006},
   Month = {April},
   Key = {fds47856}
}


%% Papers Accepted   
@article{fds52331,
   Author = {David F. Anderson and Jonathan C. Mattingly and H. Frederik
             Nijhout and Michael Reed},
   Title = {Propagation of Fluctuations in Biochemical Systems, I:
             Linear SSC Networks},
   Journal = {Bulletin of Mathematical Biology},
   Year = {2006},
   url = {http://arxiv.org/abs/math/0510642},
   Abstract = {We investigate the propagation of random fluctuations
             through biochemical networks in which the concentrations of
             species are large enough so that the unperturbed problem is
             well-described by ordinary differential equation. We
             characterize the behavior of variance as fluctuations
             propagate down chains, study the effect of side chains and
             feedback loops, and investigate the asymptotic behavior as
             one rate constant gets large. We also describe how the ideas
             can be applied to the study of methionine
             metabolism.},
   Key = {fds52331}
}


%% Papers Submitted   
@article{fds49074,
   Author = {David F. Anderson and Jonathan C. Mattingly},
   Title = {Propagation of Fluctuations in Biochemical Reaction Systems,
             II: Nonlinear Chains},
   Year = {2006},
   Month = {Fall},
   Abstract = {We consider biochemical reaction chains and investigate how
             random fluctuations, as characterized by variance, propagate
             down the chains. We perform such a study under the
             assumption that the number of molecules is high enough so
             that the behavior of the concentrations of the system is
             well approximated by differential equations. We conclude
             that the variances of the fluxes will decrease as one moves
             down the chain and, through an example, show that there is
             no corresponding result for the variances of the chemical
             species.},
   Key = {fds49074}
}