Fitzpatrick Institute for Photonics Fitzpatrick Institute for Photonics
Pratt School of Engineering
Duke University
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Sina Farsiu, Assistant Professor of Ophthalmology

Sina Farsiu
Contact Info:
Office Location:  2575 CIEMAS
Office Phone:  (919) 684-6642
Email Address: send me a message
Web Page:  http://faculty.duhs.duke.edu/faculty/info?pid=24069

Education:

M.S.University of Tehran (Iran)2001
B.S.Sharif University of Technology (Iran)1999
Specialties:

Medical Imaging
Photonics
Signal Processing
Medical Diagnostics
Cancer diagnostics and therapy
Diagnostics

Representative Publications   (More Publications)

  1. Chiu, SJ; Toth, CA; Bowes Rickman, C; Izatt, JA; Farsiu, S, Automatic segmentation of closed-contour features in ophthalmic images using graph theory and dynamic programming., Biomed Opt Express, vol. 3 no. 5 (May, 2012), pp. 1127-1140, OSA [22567602], [doi]  [abs]
  2. Fang, L; Li, S; Nie, Q; Izatt, JA; Toth, CA; Farsiu, S, Sparsity based denoising of spectral domain optical coherence tomography images., Biomed Opt Express, vol. 3 no. 5 (May, 2012), pp. 927-942, http://www.opticsinfobase.org/boe/abstract.cfm?uri=boe-3-5-927 [22567586], [doi]  [abs]
  3. R Estrada, C Tomasi, MT Cabrera, DK Wallace, SF Freedman, S Farsiu, Exploratory Dijkstra forest based automatic vessel segmentation: applications in video indirect ophthalmoscopy (VIO)., Biomedical optics express, vol. 3 no. 2 (February, 2012), pp. 327-39, ISSN 2156-7085 [doi]  [abs]
  4. Chiu, SJ; Izatt, JA; O'Connell, RV; Winter, KP; Toth, CA; Farsiu, S, Validated automatic segmentation of AMD pathology including drusen and geographic atrophy in SD-OCT images., Invest Ophthalmol Vis Sci, vol. 53 no. 1 (January, 2012), pp. 53-61 [22039246], [doi]  [abs]
  5. Estrada, R; Tomasi, C; Cabrera, MT; Wallace, DK; Freedman, SF; Farsiu, S, Enhanced video indirect ophthalmoscopy (VIO) via robust mosaicing., Biomed Opt Express, vol. 2 no. 10 (October, 2011), pp. 2871-2887, ISSN 2156-7085 [22091442], [doi]  [abs]
  6. Larocca, F; Chiu, SJ; McNabb, RP; Kuo, AN; Izatt, JA; Farsiu, S, Robust automatic segmentation of corneal layer boundaries in SDOCT images using graph theory and dynamic programming., Biomed Opt Express, vol. 2 no. 6 (June, 2011), pp. 1524-1538, ISSN 2156-7085 [21698016], [doi]  [abs]
  7. Robinson, MD; Toth, CA; Lo, JY; Farsiu, S, Efficient fourier-wavelet super-resolution., IEEE Trans Image Process, vol. 19 no. 10 (October, 2010), pp. 2669-2681, ISSN 1941-0042 [20460208], [doi]  [abs]
  8. Chiu, SJ; Li, XT; Nicholas, P; Toth, CA; Izatt, JA; Farsiu, S, Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation., Opt Express, vol. 18 no. 18 (August, 2010), pp. 19413-19428, ISSN 1094-4087 [20940837], [doi]  [abs]
  9. Farsiu, S; Christofferson, J; Eriksson, B; Milanfar, P; Friedlander, B; Shakouri, A; Nowak, R, Statistical detection and imaging of objects hidden in turbid media using ballistic photons., Appl Opt, vol. 46 no. 23 (August, 2007), pp. 5805-5822, ISSN 0003-6935 [17694130], [doi]  [abs]
  10. Farsiu, S; Elad, M; Milanfar, P, Multiframe demosaicing and super-resolution of color images., IEEE Trans Image Process, vol. 15 no. 1 (January, 2006), pp. 141-159, ISSN 1057-7149 [16435545], [doi]  [abs]
  11. Video-to-Video Dynamic Superresolution for Grayscale and Color Sequences, S. Farsiu, M. Elad, and P. Milanfar, EURASIP Journal of Applied Signal Processing, Jan. 2006.
  12. Farsiu, S; Robinson, MD; Elad, M; Milanfar, P, Fast and robust multiframe super resolution., IEEE transactions on image processing : a publication of the IEEE Signal Processing Society, vol. 13 no. 10 (October, 2004), pp. 1327-1344, ISSN 1057-7149 [15462143], [doi]  [abs]
  13. SJ Chiu, JA Izatt, RV O'Connell, KP Winter, CA Toth, S Farsiu, Validated automatic segmentation of AMD pathology including drusen and geographic atrophy in SD-OCT images., Investigative ophthalmology & visual science, vol. 53 no. 1 (January, 2012), pp. 53-61, ISSN 1552-5783 [doi]  [abs]
  14. R Estrada, C Tomasi, MT Cabrera, DK Wallace, SF Freedman, S Farsiu, Enhanced video indirect ophthalmoscopy (VIO) via robust mosaicing., Biomedical optics express, vol. 2 no. 10 (October, 2011), pp. 2871-87, ISSN 2156-7085 [doi]  [abs]
Selected Grant Support

  • Computer Aided Classification of Diabetic Macular Edema, National Institutes of Health, R01 EY022691 01.      
  • Portable Motion Compensated SDOCT System for Imaging Young Children, National Institutes of Health, R21 EY021321 01A1.      
  • Non-invasive monitoring and diagnosis of ocular neurodegenerative diseases using cell density measurement via angle-resolved low coherence interferometry, Duke University.      
  • Ultrahigh-Resolution Adaptive Optics Optical Coherence Tomography/Scanning Laser Ophthalmoscopy System, North Carolina Biotechnology Center.      
Selected Patents

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