Publications of Masayuki Onishi    :chronological  alphabetical  combined  bibtex listing:

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Papers Published

  1. Wang, L; Patena, W; Van Baalen, KA; Xie, Y; Singer, ER; Gavrilenko, S; Warren-Williams, M; Han, L; Harrigan, HR; Hartz, LD; Chen, V; Ton, VTNP; Kyin, S; Shwe, HH; Cahn, MH; Wilson, AT; Onishi, M; Hu, J; Schnell, DJ; McWhite, CD; Jonikas, MC, A chloroplast protein atlas reveals punctate structures and spatial organization of biosynthetic pathways., Cell, vol. 186 no. 16 (August, 2023), pp. 3499-3518.e14 [doi]  [abs].
  2. Delic, S; Ramundo, S; Onishi, M, Association of single algal septin with evolutionarily related chloroplast translocons, Molecular Biology of the Cell, vol. 34 no. 2 (2023), pp. 265-266 .
  3. Pecani, K; Lieberman, K; Tajima-Shirasaki, N; Onishi, M; Cross, FR, Control of division in Chlamydomonas by cyclin B/CDKB1 and the anaphase-promoting complex., Plos Genetics, vol. 18 no. 8 (August, 2022), pp. e1009997 [doi]  [abs].
  4. Fauser, F; Vilarrasa-Blasi, J; Onishi, M; Ramundo, S; Patena, W; Millican, M; Osaki, J; Philp, C; Nemeth, M; Salomé, PA; Li, X; Wakao, S; Kim, RG; Kaye, Y; Grossman, AR; Niyogi, KK; Merchant, SS; Cutler, SR; Walter, P; Dinneny, JR; Jonikas, MC; Jinkerson, RE, Systematic characterization of gene function in the photosynthetic alga Chlamydomonas reinhardtii., Nature Genetics, vol. 54 no. 5 (May, 2022), pp. 705-714 [doi]  [abs].
  5. Cleves, PA; Krediet, CJ; Lehnert, EM; Onishi, M; Pringle, JR, Insights into coral bleaching under heat stress from analysis of gene expression in a sea anemone model system., Proceedings of the National Academy of Sciences of the United States of America, vol. 117 no. 46 (November, 2020), pp. 28906-28917 [doi]  [abs].
  6. Onishi, M; Umen, JG; Cross, FR; Pringle, JR, Cleavage-furrow formation without F-actin in Chlamydomonas., Proceedings of the National Academy of Sciences of the United States of America, vol. 117 no. 31 (August, 2020), pp. 18511-18520 [doi]  [abs].
  7. Vilarrasa-Blasi, J; Fauser, F; Onishi, M; Ramundo, S; Patena, W; Millican, M; Osaki, J; Philp, C; Nemeth, M; Salomé, PA; Li, X; Wakao, S; Kim, RG; Kaye, Y; Grossman, AR; Niyogi, KK; Merchant, S; Cutler, S; Walter, P; Dinneny, JR; Jonikas, MC; Jinkerson, RE, Systematic characterization of gene function in a photosynthetic organism, bioRxiv (January, 2020), pp. 2020.12.11.420950 [doi]  [abs].
  8. Chao, JT; Piña, F; Onishi, M; Cohen, Y; Lai, Y-S; Schuldiner, M; Niwa, M, Transfer of the Septin Ring to Cytokinetic Remnants in ER Stress Directs Age-Sensitive Cell-Cycle Re-entry., Developmental Cell, vol. 51 no. 2 (October, 2019), pp. 173-191.e5 [doi]  [abs].
  9. Onishi, M; Pecani, K; Jones, T; Pringle, JR; Cross, FR, F-actin homeostasis through transcriptional regulation and proteasome-mediated proteolysis., Proceedings of the National Academy of Sciences of the United States of America, vol. 115 no. 28 (July, 2018), pp. E6487-E6496 [doi]  [abs].
  10. Wang, M; Nishihama, R; Onishi, M; Pringle, JR, Role of the Hof1-Cyk3 interaction in cleavage-furrow ingression and primary-septum formation during yeast cytokinesis., Molecular Biology of the Cell, vol. 29 no. 5 (March, 2018), pp. 597-609 [doi]  [abs].
  11. Xiang, T; Jinkerson, RE; Clowez, S; Tran, C; Krediet, CJ; Onishi, M; Cleves, PA; Pringle, JR; Grossman, AR, Glucose-Induced Trophic Shift in an Endosymbiont Dinoflagellate with Physiological and Molecular Consequences., Plant Physiology, vol. 176 no. 2 (February, 2018), pp. 1793-1807 [doi]  [abs].
  12. Onishi, M; Pringle, JR, Robust Transgene Expression from Bicistronic mRNA in the Green Alga Chlamydomonas reinhardtii., G3 (Bethesda, Md.), vol. 6 no. 12 (December, 2016), pp. 4115-4125 [doi]  [abs].
  13. Yamasaki, T; Onishi, M; Kim, E-J; Cerutti, H; Ohama, T, RNA-binding protein DUS16 plays an essential role in primary miRNA processing in the unicellular alga Chlamydomonas reinhardtii., Proceedings of the National Academy of Sciences of the United States of America, vol. 113 no. 38 (September, 2016), pp. 10720-10725 [doi]  [abs].
  14. Chin, CF; Tan, K; Onishi, M; Chew, Y; Augustine, B; Lee, WR; Yeong, FM, Timely Endocytosis of Cytokinetic Enzymes Prevents Premature Spindle Breakage during Mitotic Exit., Plos Genetics, vol. 12 no. 7 (July, 2016), pp. e1006195 [doi]  [abs].
  15. Zhu, L; Li, Q; Wong, SHK; Huang, M; Klein, BJ; Shen, J; Ikenouye, L; Onishi, M; Schneidawind, D; Buechele, C; Hansen, L; Duque-Afonso, J; Zhu, F; Martin, GM; Gozani, O; Majeti, R; Kutateladze, TG; Cleary, ML, ASH1L Links Histone H3 Lysine 36 Dimethylation to MLL Leukemia., Cancer Discovery, vol. 6 no. 7 (July, 2016), pp. 770-783 [doi]  [abs].
  16. Onishi, M; Pringle, JR; Cross, FR, Evidence That an Unconventional Actin Can Provide Essential F-Actin Function and That a Surveillance System Monitors F-Actin Integrity in Chlamydomonas., Genetics, vol. 202 no. 3 (March, 2016), pp. 977-996 [doi]  [abs].
  17. Bieri, T; Onishi, M; Xiang, T; Grossman, AR; Pringle, JR, Relative Contributions of Various Cellular Mechanisms to Loss of Algae during Cnidarian Bleaching., Plos One, vol. 11 no. 4 (January, 2016), pp. e0152693 [doi]  [abs].
  18. Lopez, V; Barinova, N; Onishi, M; Pobiega, S; Pringle, JR; Dubrana, K; Marcand, S, Cytokinesis breaks dicentric chromosomes preferentially at pericentromeric regions and telomere fusions., Genes & Development, vol. 29 no. 3 (February, 2015), pp. 322-336 [doi]  [abs].
  19. Avasthi, P; Onishi, M; Karpiak, J; Yamamoto, R; Mackinder, L; Jonikas, MC; Sale, WS; Shoichet, B; Pringle, JR; Marshall, WF, Actin is required for IFT regulation in Chlamydomonas reinhardtii., Current Biology : Cb, vol. 24 no. 17 (September, 2014), pp. 2025-2032 [doi]  [abs].
  20. Onishi, M; Ko, N; Nishihama, R; Pringle, JR, Distinct roles of Rho1, Cdc42, and Cyk3 in septum formation and abscission during yeast cytokinesis., The Journal of Cell Biology, vol. 202 no. 2 (July, 2013), pp. 311-329 [doi]  [abs].
  21. Onishi, M; Klass, DM; Brown, PO; Pringle, JR, Role of Mitosis-Specific Translation in yeast cytokinesis, Yeast (Chichester, England), vol. 30 (2013), pp. 195-195 .
  22. Onishi, M; Nishihama, R; Ko, N; Pringle, JR, Actomyosin-ring-independent role of Rho1 in cytokinesis and a novel mechanism for its regulation by Cyk3, Yeast (Chichester, England), vol. 30 (2013), pp. 70-70 .
  23. Pollard, LW; Onishi, M; Pringle, JR; Lord, M, Fission yeast Cyk3p is a transglutaminase-like protein that participates in cytokinesis and cell morphogenesis., Molecular Biology of the Cell, vol. 23 no. 13 (July, 2012), pp. 2433-2444 [doi]  [abs].
  24. Nishihama, R; Onishi, M; Pringle, JR, New insights into the phylogenetic distribution and evolutionary origins of the septins., Biological Chemistry, vol. 392 no. 8-9 (August, 2011), pp. 681-687 [doi]  [abs].
  25. Wloka, C; Nishihama, R; Onishi, M; Oh, Y; Hanna, J; Pringle, JR; Krauss, M; Bi, E, Evidence that a septin diffusion barrier is dispensable for cytokinesis in budding yeast., Biological Chemistry, vol. 392 no. 8-9 (August, 2011), pp. 813-829 [doi]  [abs].
  26. Onishi, M; Koga, T; Hirata, A; Nakamura, T; Asakawa, H; Shimoda, C; Bähler, J; Wu, J-Q; Takegawa, K; Tachikawa, H; Pringle, JR; Fukui, Y, Role of septins in the orientation of forespore membrane extension during sporulation in fission yeast., Molecular and Cellular Biology, vol. 30 no. 8 (April, 2010), pp. 2057-2074 [doi]  [abs].
  27. Nishihama, R; Schreiter, JH; Onishi, M; Vallen, EA; Hanna, J; Moravcevic, K; Lippincott, MF; Han, H; Lemmon, MA; Pringle, JR; Bi, E, Role of Inn1 and its interactions with Hof1 and Cyk3 in promoting cleavage furrow and septum formation in S. cerevisiae., The Journal of Cell Biology, vol. 185 no. 6 (June, 2009), pp. 995-1012 [doi]  [abs].
  28. Onishi, M; Iida, M; Koga, T; Yamada, S; Hirata, A; Iwaki, T; Takegawa, K; Fukui, Y; Tachikawa, H, Schizosaccharomyces pombe Sst4p, a conserved Vps27/Hrs homolog, functions downstream of phosphatidylinositol 3-kinase Pik3p to mediate proper spore formation., Eukaryotic Cell, vol. 6 no. 12 (December, 2007), pp. 2343-2353 [doi]  [abs].
  29. Iwaki, T; Onishi, M; Ikeuchi, M; Kita, A; Sugiura, R; Giga-Hama, Y; Fukui, Y; Takegawa, K, Essential roles of class E Vps proteins for sorting into multivesicular bodies in Schizosaccharomyces pombe., Microbiology, vol. 153 no. Pt 8 (August, 2007), pp. 2753-2764 [doi]  [abs].
  30. Koga, T; Onishi, M; Nakamura, Y; Hirata, A; Nakamura, T; Shimoda, C; Iwaki, T; Takegawa, K; Fukui, Y, Sorting nexin homologues are targets of phosphatidylinositol 3-phosphate in sporulation of Schizosaccharomyces pombe., Genes to Cells : Devoted to Molecular & Cellular Mechanisms, vol. 9 no. 6 (June, 2004), pp. 561-574 [doi]  [abs].
  31. Onishi, M; Nakamura, Y; Koga, T; Takegawa, K; Fukui, Y, Isolation of suppressor mutants of phosphatidylinositol 3-phosphate 5-kinase deficient cells in Schizosaccharomyces pombe., Bioscience, Biotechnology, and Biochemistry, vol. 67 no. 8 (August, 2003), pp. 1772-1779 [doi]  [abs].
  32. Iwaki, T; Osawa, F; Onishi, M; Koga, T; Fujita, Y; Hosomi, A; Tanaka, N; Fukui, Y; Takegawa, K, Characterization of vps33+, a gene required for vacuolar biogenesis and protein sorting in Schizosaccharomyces pombe., Yeast (Chichester, England), vol. 20 no. 10 (July, 2003), pp. 845-855 [doi]  [abs].
  33. Onishi, M; Koga, T; Morita, R; Nakamura, Y; Nakamura, T; Shimoda, C; Takegawa, K; Hirata, A; Fukui, Y, Role of phosphatidylinositol 3-phosphate in formation of forespore membrane in Schizosaccharomyces pombe., Yeast (Chichester, England), vol. 20 no. 3 (February, 2003), pp. 193-206 [doi]  [abs].

Papers Submitted

  1. McWhite, C; Sae-Lee, W; Yuan, Y; Mallam, A; Gort-Freitas, N; Ramundo, S; Onishi, M; Marcotte, E, Alternative proteoforms and proteoform-dependent assemblies in humans and plants, in bioRxiv (2022) [doi] .

Book Chapters

  1. Avasthi, P; Onishi, M, The cellular cytoskeleton, in The Chlamydomonas Sourcebook: Volume 3: Cell Motility and Behavior, vol. 3 (January, 2023), pp. 433-445 [doi]  [abs].
  2. Onishi, M; Pringle, JR, The nonopisthokont septins: How many there are, how little we know about them, and how we might learn more., vol. 136 (January, 2016), pp. 1-19 [doi]  [abs].
  3. Onishi, M; Pringle, JR, Analysis of Rho-GTPase Activity During Budding Yeast Cytokinesis., vol. 1369 (January, 2016), pp. 205-218 [doi]  [abs].

Preprints

  1. R.G. Kim, W. Huang, F. Findinier, F. Bunburry, P. Redekop, R. Shrestha, J. Vilarrasa-Blasi, R.E. Jinkerson, N. Fakhim, F. Fauser, M.C. Jonikas, M. Onishi, S-L. Xu, A.R. Grossman, Chloroplast Methyltransferase Homolog RMT2 is Involved in Photosystem I Biogenesis (2023) [doi] .