Publications of Marc D. Ryser    :chronological  alphabetical  combined  bibtex listing:

Papers Published

1. Byng, D; Thomas, SM; Rushing, CN; Lynch, T; McCarthy, A; Francescatti, AB; Frank, ES; Partridge, AH; Thompson, AM; Retèl, VP; van Harten, WH; Grimm, LJ; Hyslop, T; Hwang, ES; Ryser, MD, Surveillance Imaging after Primary Diagnosis of Ductal Carcinoma in Situ., Radiology, vol. 307 no. 1 (April, 2023), pp. e221210 [doi]  [abs]
2. Etzioni, R; Gulati, R; Owens, L; Lange, J; Ryser, MD, Opportunity for interception as a driver of benefit in cancer early detection: implications for multi-cancer early detection testing., Cancer Prevention Research, vol. 16 no. 1 (2023), pp. 6-6
3. Fridman, I; Chan, L; Thomas, J; Fish, LJ; Falkovic, M; Brioux, J; Hunter, N; Ryser, DH; Hwang, ES; Pollak, KI; Weinfurt, KP; Ryser, MD, A web-based personalized decision support tool for patients diagnosed with ductal carcinoma in situ: development, content evaluation, and usability testing., Breast Cancer Res Treat, vol. 192 no. 3 (April, 2022), pp. 517-527 [doi]  [abs]
4. Ryser, MD; Lange, J; Inoue, LYT; O'Meara, ES; Gard, C; Miglioretti, DL; Bulliard, J-L; Brouwer, AF; Hwang, ES; Etzioni, RB, Estimation of Breast Cancer Overdiagnosis in a U.S. Breast Screening Cohort., Ann Intern Med, vol. 175 no. 4 (April, 2022), pp. 471-478 [doi]  [abs]
5. Schapiro, D; Yapp, C; Sokolov, A; Reynolds, SM; Chen, Y-A; Sudar, D; Xie, Y; Muhlich, J; Arias-Camison, R; Arena, S; Taylor, AJ; Nikolov, M; Tyler, M; Lin, J-R; Burlingame, EA; Human Tumor Atlas Network, ; Chang, YH; Farhi, SL; Thorsson, V; Venkatamohan, N; Drewes, JL; Pe'er, D; Gutman, DA; Herrmann, MD; Gehlenborg, N; Bankhead, P; Roland, JT; Herndon, JM; Snyder, MP; Angelo, M; Nolan, G; Swedlow, JR; Schultz, N; Merrick, DT; Mazzili, SA; Cerami, E; Rodig, SJ; Santagata, S; Sorger, PK, MITI minimum information guidelines for highly multiplexed tissue images., Nat Methods, vol. 19 no. 3 (March, 2022), pp. 262-267 [doi]  [abs]
6. Schmitz, RSJM; van den Belt-Dusebout, SW; Cresta, C; Liu, Y-H; Schaapveld, M; Clements, K; Timbres, J; Byng, DT; Ryser, MD; Ren, Y; Lynch, T; Hyslop, T; Menegaz, B; Collyar, D; Hwang, S; Thompson, A; Sawyer, E; Wesseling, J; Lips, EH; Schmidt, MK, Abstract P1-22-02: Subsequent risk of ipsilateral breast events in a multinational DCIS cohort of 48.619 patients: A meta-analysis within the PRECISION consortium, Cancer Research, vol. 82 no. 4_Supplement (February, 2022), American Association for Cancer Research (AACR) [doi]  [abs]
7. Grimm, LJ; Rahbar, H; Abdelmalak, M; Hall, AH; Ryser, MD, Ductal Carcinoma in Situ: State-of-the-Art Review., Radiology, vol. 302 no. 2 (February, 2022), pp. 246-255 [doi]  [abs]
8. Schmitz, RS; van den Belt-Dusebout, AW; Clements, K; Ren, Y; Cresta, C; Timbres, J; Liu, Y-H; Byng, D; Lynch, T; Menegaz, B; Collyar, D; Hyslop, T; Schaapveld, M; Sawyer, E; Hwang, SE; Thompson, A; Ryser, MD; Wesseling, J; Lips, EH; Schmidt, MK, Subsequent invasive breast cancer risk after DCIS treatment in multinational PRECISION consortium cohorts comprising 48,576 patients, Cancer Research, vol. 82 no. 12 (2022)
9. Murgas, KA; Ma, Y; Shahidi, LK; Mukherjee, S; Allen, AS; Shibata, D; Ryser, MD, A Bayesian hierarchical model to estimate DNA methylation conservation in colorectal tumors., Bioinformatics, vol. 38 no. 1 (December, 2021), pp. 22-29 [doi]  [abs]
10. van Seijen, M; Lips, EH; Fu, L; Giardiello, D; van Duijnhoven, F; de Munck, L; Elshof, LE; Thompson, A; Sawyer, E; Ryser, MD; Hwang, ES; Schmidt, MK; Elkhuizen, PHM; Grand Challenge PRECISION Consortium, ; Wesseling, J; Schaapveld, M, Long-term risk of subsequent ipsilateral lesions after surgery with or without radiotherapy for ductal carcinoma in situ of the breast., Br J Cancer, vol. 125 no. 10 (November, 2021), pp. 1443-1449 [doi]  [abs]
11. Byng, D; Retel, VP; van Harten, W; Rushing, CN; Thomas, SM; Lynch, T; McCarthy, A; Francescatti, AB; Frank, ES; Partridge, AH; Thompson, AM; Grimm, L; Hyslop, T; Hwang, E-SS; Ryser, MD, Disparities in surveillance imaging after breast conserving surgery for primary DCIS., Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology, vol. 39 no. 15_suppl (May, 2021), pp. 6516-6516, American Society of Clinical Oncology (ASCO) [doi]  [abs]
12. Chan, L; Fridman, I; Grant, J; Hwang, ES; Weinfurt, K; Ryser, MD, USING PAIRWISE SIMULATED OUTCOMES TO IMPROVE THE UNDERSTANDING OF THE STATISTICAL DIFFERENCES BETWEEN TWO RISK DISTRIBUTIONS, Medical Decision Making : an International Journal of the Society for Medical Decision Making, vol. 41 no. 4 (2021), pp. E284-E286
13. Ryser, MD; Rushing, CN; Thomas, SM; Lynch, T; McCarthy, A; Mohammed, ZA; Francescatti, AB; Frank, ES; Partridge, AH; Thompson, AM; Hyslop, T; Hwang, ES, Ipsilateral invasive cancer risk after diagnosis with ductal carcinoma in situ in patients with and without index surgery: The effects of endocrine therapy and radiation treatment, Cancer Research, vol. 81 no. 4 (2021)
14. Butt, J; Blot, WJ; Visvanathan, K; Le Marchand, L; Wilkens, LR; Chen, Y; Sesso, HD; Teras, L; Ryser, MD; Hyslop, T; Wassertheil-Smoller, S; Tinker, LF; Potter, JD; Song, M; Berndt, SI; Waterboer, T; Pawlita, M; Epplein, M, Auto-antibodies to p53 and the Subsequent Development of Colorectal Cancer in a U.S. Prospective Cohort Consortium., Cancer Epidemiol Biomarkers Prev, vol. 29 no. 12 (December, 2020), pp. 2729-2734 [doi]  [abs]
15. Brouwer, AF; He, K; Chinn, SB; Mondul, AM; Chapman, CH; Ryser, MD; Banerjee, M; Eisenberg, MC; Meza, R; Taylor, JMG, Time-varying survival effects for squamous cell carcinomas at oropharyngeal and nonoropharyngeal head and neck sites in the United States, 1973-2015., Cancer, vol. 126 no. 23 (December, 2020), pp. 5137-5146 [doi]  [abs]
16. Rodriguez-Homs, LG; Hammill, BG; Ryser, MD; Phillips, HR; Mosca, PJ, Relationship Between HCAHPS Scores and Survey Response Rate Is Linked to Hospital Size., J Patient Exp, vol. 7 no. 6 (December, 2020), pp. 1543-1548 [doi]  [abs]
17. Epplein, M; Le Marchand, L; Cover, TL; Song, M; Blot, WJ; Peek, RM; Teras, LR; Visvanathan, K; Chen, Y; Sesso, HD; Zeleniuch-Jacquotte, A; Berndt, SI; Potter, JD; Ryser, MD; Haiman, CA; Wassertheil-Smoller, S; Tinker, LF; Waterboer, T; Butt, J, Association of Combined Sero-Positivity to Helicobacter pylori and Streptococcus gallolyticus with Risk of Colorectal Cancer., Microorganisms, vol. 8 no. 11 (October, 2020) [doi]  [abs]
18. Shehata, MN; Rahbar, H; Flanagan, MR; Kilgore, MR; Lee, CI; Ryser, MD; Lowry, KP, Risk for Upgrade to Malignancy After Breast Core Needle Biopsy Diagnosis of Lobular Neoplasia: A Systematic Review and Meta-Analysis., Journal of the American College of Radiology : Jacr, vol. 17 no. 10 (October, 2020), pp. 1207-1219 [doi]  [abs]
19. Williamson, T; Ryser, MD; Ubel, PA; Abdelgadir, J; Spears, CA; Liu, B; Komisarow, J; Lemmon, ME; Elsamadicy, A; Lad, SP, Withdrawal of Life-supporting Treatment in Severe Traumatic Brain Injury., Jama Surg, vol. 155 no. 8 (August, 2020), pp. 723-731 [doi]  [abs]
20. Chootipongchaivat, S; van Ravesteyn, NT; Li, X; Huang, H; Weedon-Fekjær, H; Ryser, MD; Weaver, DL; Burnside, ES; Heckman-Stoddard, BM; de Koning, HJ; Lee, SJ, Modeling the natural history of ductal carcinoma in situ based on population data., Breast Cancer Res, vol. 22 no. 1 (May, 2020), pp. 53 [doi]  [abs]
21. Rozenblatt-Rosen, O; Regev, A; Oberdoerffer, P; Nawy, T; Hupalowska, A; Rood, JE; Ashenberg, O; Cerami, E; Coffey, RJ; Demir, E; Ding, L; Esplin, ED; Ford, JM; Goecks, J; Ghosh, S; Gray, JW; Guinney, J; Hanlon, SE; Hughes, SK; Hwang, ES; Iacobuzio-Donahue, CA; Jané-Valbuena, J; Johnson, BE; Lau, KS; Lively, T; Mazzilli, SA; Pe'er, D; Santagata, S; Shalek, AK; Schapiro, D; Snyder, MP; Sorger, PK; Spira, AE; Srivastava, S; Tan, K; West, RB; Williams, EH; Human Tumor Atlas Network,, The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution., Cell, vol. 181 no. 2 (April, 2020), pp. 236-249 [doi]  [abs]
22. Ryser, MD; Mallo, D; Hall, A; Hardman, T; King, LM; Tatishchev, S; Sorribes, IC; Maley, CC; Marks, JR; Hwang, ES; Shibata, D, Minimal barriers to invasion during human colorectal tumor growth., Nature Communications, vol. 11 no. 1 (March, 2020), pp. 1280 [doi]  [abs]
23. Ryser, MD; Hwang, ES, Response to Habel and Buist., J Natl Cancer Inst, vol. 112 no. 2 (February, 2020), pp. 216-217 [doi]
24. Fridman, I; Kumaresan, V; Vijendra, P; Seshadri, P; Garland, S; Kim, G; Fagerlin, A; Ubel, PA; Ryser, MD, INFORMATION PROCESSING AND PATIENT DECISION MAKING: A BIG DATA APPROACH TO TREATMENT CHOICE IN PROSTATE CANCER PATIENTS, Medical Decision Making : an International Journal of the Society for Medical Decision Making, vol. 40 no. 1 (January, 2020), pp. E183-E184, SAGE PUBLICATIONS INC
25. Williamson, T; Ryser, MD; Abdelgadir, J; Lemmon, M; Barks, MC; Zakare, R; Ubel, PA, Surgical decision making in the setting of severe traumatic brain injury: A survey of neurosurgeons., Plos One, vol. 15 no. 3 (2020), pp. e0228947 [doi]  [abs]
26. Ryser, MD; Sorribes, IC; Greenwald, M; Wu, E; Hall, A; Mallo, D; King, LM; Hardman, T; Simpson, L; Maley, CC; Marks, JR; Shibata, D; Hwang, ES, Inferring the evolutionary dynamics of ductal carcinoma in situ through multi-regional sequencing and mathematical modeling., Cancer Research, vol. 80 no. 21 (2020)
27. Ryser, MD; Hendrix, L; Thomas, SM; Lynch, T; McCarthy, A; Mohammed, Z; Francescatti, AB; Frank, ES; Partridge, AH; Thompson, AM; Hyslop, T; Hwang, E-SS, Ipsilateral invasive cancer risk after diagnosis with ductal carcinoma in situ (DCIS): Comparison of patients with and without index surgery., Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology, vol. 38 no. 15 (2020)
28. Ryser, MD; Weaver, DL; Zhao, F; Worni, M; Grimm, LJ; Gulati, R; Etzioni, R; Hyslop, T; Lee, SJ; Hwang, ES, Cancer Outcomes in DCIS Patients Without Locoregional Treatment., J Natl Cancer Inst, vol. 111 no. 9 (September, 2019), pp. 952-960 [doi]  [abs]
29. Ryser, MD; Hendrix, LH; Worni, M; Liu, Y; Hyslop, T; Hwang, ES, Incidence of Ductal Carcinoma In Situ in the United States, 2000-2014., Cancer Epidemiol Biomarkers Prev, vol. 28 no. 8 (August, 2019), pp. 1316-1323 [doi]  [abs]
30. Grimm, LJ; Miller, MM; Thomas, SM; Liu, Y; Lo, JY; Hwang, ES; Hyslop, T; Ryser, MD, Growth Dynamics of Mammographic Calcifications: Differentiating Ductal Carcinoma in Situ from Benign Breast Disease., Radiology, vol. 292 no. 1 (July, 2019), pp. 77-83 [doi]  [abs]
31. Shen, Y; Dong, W; Gulati, R; Ryser, MD; Etzioni, R, Estimating the frequency of indolent breast cancer in screening trials., Stat Methods Med Res, vol. 28 no. 4 (April, 2019), pp. 1261-1271 [doi]  [abs]
32. Ryser, MD; Gulati, R; Eisenberg, MC; Shen, Y; Hwang, ES; Etzioni, RB, Identification of the Fraction of Indolent Tumors and Associated Overdiagnosis in Breast Cancer Screening Trials., American Journal of Epidemiology, vol. 188 no. 1 (January, 2019), pp. 197-205 [doi]  [abs]
33. Ryser, MD; Yu, M; Grady, W; Siegmund, K; Shibata, D, Epigenetic Heterogeneity in Human Colorectal Tumors Reveals Preferential Conservation And Evidence of Immune Surveillance., Scientific Reports, vol. 8 no. 1 (November, 2018), pp. 17292 [doi]  [abs]
34. Ryser, MD; Min, B-H; Siegmund, KD; Shibata, D, Spatial mutation patterns as markers of early colorectal tumor cell mobility., Proc Natl Acad Sci U S A, vol. 115 no. 22 (May, 2018), pp. 5774-5779 [doi]  [abs]
35. Grimm, LJ; Ryser, MD; Hyslop, T, Role of Preoperative Variables in Reducing the Rate of Occult Invasive Disease for Women Considering Active Surveillance for Ductal Carcinoma In Situ., Jama Surg, vol. 153 no. 3 (March, 2018), pp. 290-291 [doi]
36. Ryser, MD; Horton, JK; Hwang, ES, How Low Can We Go-and Should We? Risk Reduction for Minimal-Volume DCIS., Annals of Surgical Oncology, vol. 25 no. 2 (February, 2018), pp. 354-355 [doi]
37. Grimm, LJ; Ryser, MD; Partridge, AH; Thompson, AM; Thomas, JS; Wesseling, J; Hwang, ES, Surgical Upstaging Rates for Vacuum Assisted Biopsy Proven DCIS: Implications for Active Surveillance Trials., Annals of Surgical Oncology, vol. 24 no. 12 (November, 2017), pp. 3534-3540 [doi]  [abs]
38. Cao, Y; Feng, Y; Ryser, MD; Zhu, K; Herschlag, G; Cao, C; Marusak, K; Zauscher, S; You, L, Programmable assembly of pressure sensors using pattern-forming bacteria., Nat Biotechnol, vol. 35 no. 11 (November, 2017), pp. 1087-1093 [doi]  [abs]
39. Ryser, MD; Rositch, A; Gravitt, PE, Modeling of US Human Papillomavirus (HPV) Seroprevalence by Age and Sexual Behavior Indicates an Increasing Trend of HPV Infection Following the Sexual Revolution., The Journal of Infectious Diseases, vol. 216 no. 5 (September, 2017), pp. 604-611 [doi]  [abs]
40. Ryser, MD; Gravitt, PE; Myers, ER, Mechanistic mathematical models: An underused platform for HPV research., Papillomavirus Research (Amsterdam, Netherlands), vol. 3 (June, 2017), pp. 46-49 [doi]  [abs]
41. Ryser, MD; Murgas, KA, Bone remodeling as a spatial evolutionary game., J Theor Biol, vol. 418 (April, 2017), pp. 16-26 [doi]  [abs]
42. Storey, K; Ryser, MD; Leder, K; Foo, J, Spatial Measures of Genetic Heterogeneity During Carcinogenesis., Bull Math Biol, vol. 79 no. 2 (February, 2017), pp. 237-276 [doi]  [abs]
43. Ryser, MD; Lee, WT; Ready, NE; Leder, KZ; Foo, J, Quantifying the Dynamics of Field Cancerization in Tobacco-Related Head and Neck Cancer: A Multiscale Modeling Approach., Cancer Res, vol. 76 no. 24 (December, 2016), pp. 7078-7088 [doi]  [abs]
44. Ryser, MD; Worni, M; Turner, EL; Marks, JR; Durrett, R; Hwang, ES, Outcomes of Active Surveillance for Ductal Carcinoma in Situ: A Computational Risk Analysis., J Natl Cancer Inst, vol. 108 no. 5 (May, 2016), pp. djv372 [doi]  [abs]
45. Cao, Y; Ryser, MD; Payne, S; Li, B; Rao, CV; You, L, Collective Space-Sensing Coordinates Pattern Scaling in Engineered Bacteria., Cell, vol. 165 no. 3 (April, 2016), pp. 620-630 [doi]  [abs]
46. Worni, M; Akushevich, I; Greenup, R; Sarma, D; Ryser, MD; Myers, ER; Hwang, ES, Trends in Treatment Patterns and Outcomes for Ductal Carcinoma In Situ., J Natl Cancer Inst, vol. 107 no. 12 (December, 2015), pp. djv263 [doi]  [abs]
47. Ryser, MD; McGoff, K; Herzog, DP; Sivakoff, DJ; Myers, ER, Impact of coverage-dependent marginal costs on optimal HPV vaccination strategies., Epidemics, vol. 11 (June, 2015), pp. 32-47, ISSN 1755-4365 [repository], [doi]  [abs]
48. Ryser, MD; Myers, ER; Durrett, R, HPV clearance and the neglected role of stochasticity., Plos Computational Biology, vol. 11 no. 3 (March, 2015), pp. e1004113 [doi]  [abs]
49. Ryser, MD; Komarova, SV, Mathematical Modeling of Cancer Metastases, in Computational Bioengineering (January, 2015), pp. 211-230, CRC, ISBN 9781466517561 [doi]  [abs]
50. Foo, J; Leder, K; Ryser, MD, Multifocality and recurrence risk: a quantitative model of field cancerization., J Theor Biol, vol. 355 (August, 2014), pp. 170-184 [doi]  [abs]
51. Payne, S; Li, B; Cao, Y; Schaeffer, D; Ryser, MD; You, L, Temporal control of self-organized pattern formation without morphogen gradients in bacteria., Molecular Systems Biology, vol. 9 no. 697 (October, 2013), pp. 697 [doi]  [abs]
52. Ryser, MD; Nigam, N; Tupper, PF, On the well-posedness of the stochastic Allen-Cahn equation in two dimensions, Journal of Computational Physics, vol. 231 no. 6 (March, 2012), pp. 2537-2550 [arXiv:1104.0720v4], [1104.0720v4], [doi]  [abs]
53. Hairer, M; Ryser, M; Weber, H, Triviality of the 2D stochastic Allen-Cahn equation, Electronic Journal of Probability, vol. 17 no. none (January, 2012), Institute of Mathematical Statistics [arXiv:1201.3089v1], [1201.3089v1], [doi]  [abs]
54. Ryser, MD; Qu, Y; Komarova, SV, Osteoprotegerin in bone metastases: mathematical solution to the puzzle., Plos Computational Biology, vol. 8 no. 10 (2012), pp. e1002703 [23093918], [doi]  [abs]
55. Ryser, MD; Komarova, SV; Nigam, N, The cellular dynamics of bone remodeling: A mathematical model, Siam Journal on Applied Mathematics, vol. 70 no. 6 (April, 2010), pp. 1899-1921 [arXiv:1111.6916v1], [1111.6916v1], [doi]  [abs]
56. Ryser, MD; Nigam, N; Komarova, SV, Mathematical modeling of spatio-temporal dynamics of a single bone multicellular unit., J Bone Miner Res, vol. 24 no. 5 (May, 2009), pp. 860-870 [19063683], [doi]  [abs]
57. Lehning, M; Loewe, H; Ryser, MD; Raderschall, N, Inhomogeneous precipitation distribution and snow transport in steep terrain, Water Resour. Res. (2008) [2007WR006545.shtml]
58. Buenzli, PR; Martin, PA; Ryser, MD, Thermal quantum electrodynamics of nonrelativistic charged fluids., Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics, vol. 75 no. 4 Pt 1 (April, 2007), pp. 041125, ISSN 1539-3755 [arXiv:quant-ph/0701192v2], [17500883], [doi]  [abs]