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Publications of Sayan Mukherjee    :chronological  alphabetical  combined  bibtex listing:

Books

  1. Banerjee, S; Hassan, MK; Mukherjee, S; Gowrisankar, A, Fractal Patterns in Nonlinear Dynamics and Applications (January, 2020), pp. 1-194, ISBN 9781498741354 [doi]  [abs]

Papers Published

  1. Kirveslahti, H; Mukherjee, S, Representing fields without correspondences: the lifted Euler characteristic transform, Journal of Applied and Computational Topology, vol. 8 no. 1 (March, 2024), pp. 1-34 [doi]  [abs]
  2. Mubayi, D; Mukherjee, S, Triangles in graphs without bipartite suspensions, Discrete Mathematics, vol. 346 no. 6 (June, 2023) [doi]  [abs]
  3. Shi, A; Berchuck, SI; Jammal, AA; Singh, G; Hunt, S; Roche, K; Mukherjee, S; Medeiros, FA, Identifying Risk Factors for Blindness From Glaucoma at First Presentation to a Tertiary Clinic., Am J Ophthalmol, vol. 250 (June, 2023), pp. 130-137 [doi]  [abs]
  4. Liu, X; Mukherjee, S, Stability theorems for some Kruskal–Katona type results, European Journal of Combinatorics, vol. 110 (May, 2023) [doi]  [abs]
  5. Lahkar, R; Mukherjee, S; Roy, S, The logit dynamic in supermodular games with a continuum of strategies: A deterministic approximation approach, Games and Economic Behavior, vol. 139 (May, 2023), pp. 133-160 [doi]  [abs]
  6. Fraiman, N; Mukherjee, S; Thoppe, G, The Shadow Knows: Empirical Distributions of Minimum Spanning Acycles and Persistence Diagrams of Random Complexes, Discrete Analysis, vol. 2023 (January, 2023) [doi]  [abs]
  7. Caprio, M; Mukherjee, S, Ergodic theorems for dynamic imprecise probability kinematics, International Journal of Approximate Reasoning, vol. 152 (January, 2023), pp. 325-343 [doi]  [abs]
  8. He, S; Mukherjee, S, Exploration of stochastic dynamics and complexity in an epidemic system, European Physical Journal: Special Topics, vol. 231 no. 18-20 (December, 2022), pp. 3281-3287 [doi]  [abs]
  9. Curry, J; Mukherjee, S; Turner, K, HOW MANY DIRECTIONS DETERMINE A SHAPE AND OTHER SUFFICIENCY RESULTS FOR TWO TOPOLOGICAL TRANSFORMS, Transactions of the American Mathematical Society Series B, vol. 9 no. 32 (October, 2022), pp. 1006-1043 [doi]  [abs]
  10. Björk, JR; Dasari, MR; Roche, K; Grieneisen, L; Gould, TJ; Grenier, J-C; Yotova, V; Gottel, N; Jansen, D; Gesquiere, LR; Gordon, JB; Learn, NH; Wango, TL; Mututua, RS; Kinyua Warutere, J; Siodi, L; Mukherjee, S; Barreiro, LB; Alberts, SC; Gilbert, JA; Tung, J; Blekhman, R; Archie, EA, Synchrony and idiosyncrasy in the gut microbiome of wild baboons., Nature ecology & evolution, vol. 6 no. 7 (July, 2022), pp. 955-964 [doi]  [abs]
  11. Tang, WS; da Silva, GM; Kirveslahti, H; Skeens, E; Feng, B; Sudijono, T; Yang, KK; Mukherjee, S; Rubenstein, B; Crawford, L, A topological data analytic approach for discovering biophysical signatures in protein dynamics., PLoS computational biology, vol. 18 no. 5 (May, 2022), pp. e1010045 [doi]  [abs]
  12. Lahkar, R; Mukherjee, S; Roy, S, Generalized perturbed best response dynamics with a continuum of strategies, Journal of Economic Theory, vol. 200 (March, 2022) [doi]  [abs]
  13. Caprio, M; Aveni, A; Mukherjee, S, Concerning three classes of non-Diophantine arithmetics, Involve, vol. 15 no. 5 (March, 2022), pp. 763-774 [doi]  [abs]
  14. McGoff, K; Mukherjee, S; Nobel, AB, GIBBS POSTERIOR CONVERGENCE AND THE THERMODYNAMIC FORMALISM, Annals of Applied Probability, vol. 32 no. 1 (February, 2022), pp. 461-496 [doi]  [abs]
  15. Mukherjee, S, A Grover Search-Based Algorithm for the List Coloring Problem, IEEE Transactions on Quantum Engineering, vol. 3 (January, 2022) [doi]  [abs]
  16. Vejdemo-Johansson, M; Mukherjee, S, MULTIPLE HYPOTHESIS TESTING WITH PERSISTENT HOMOLOGY, Foundations of Data Science, vol. 4 no. 4 (January, 2022), pp. 667-705 [doi]  [abs]
  17. Mukherjee, S; Pramanik, A, Mild and Expeditious Synthesis of Sulfenyl Enaminones of l -α-Amino Esters and Aryl/Alkyl Amines through NCS-Mediated Sulfenylation, ACS Omega, vol. 6 no. 49 (December, 2021), pp. 33805-33821 [doi]  [abs]
  18. Mukherjee, S; Fataf, NAA; Rahim, MFA; Natiq, H, Characterizing noise-induced chaos and multifractality of a finance system, European Physical Journal: Special Topics, vol. 230 no. 21-22 (December, 2021), pp. 3873-3879 [doi]  [abs]
  19. Mukherjee, S; Hua, BS; Umetani, N; Meister, D, Neural Sequence Transformation, Computer Graphics Forum, vol. 40 no. 7 (October, 2021), pp. 131-140 [doi]  [abs]
  20. He, S; Natiq, H; Mukherjee, S, Multistability and chaos in a noise-induced blood flow, European Physical Journal: Special Topics, vol. 230 no. 5 (July, 2021), pp. 1525-1533 [doi]  [abs]
  21. Yan, B; Mukherjee, S; Saha, A, Exploring noise-induced chaos and complexity in a red blood cell system, European Physical Journal: Special Topics, vol. 230 no. 5 (July, 2021), pp. 1517-1523 [doi]  [abs]
  22. Mahato, CK; Mukherjee, S; Kundu, M; Vallapure, VP; Pramanik, A, Asymmetric 1,4-Michael Addition in Aqueous Medium Using Hydrophobic Chiral Organocatalysts, Journal of Organic Chemistry, vol. 86 no. 7 (April, 2021), pp. 5213-5226 [doi]  [abs]
  23. Palit, SK; Mukherjee, S, A study on dynamics and multiscale complexity of a neuro system, Chaos, Solitons and Fractals, vol. 145 (April, 2021) [doi]  [abs]
  24. Mishra, R; Behera, BK; Mukherjee, S; Petru, M; Muller, M, Axial and radial compression behavior of composite rocket launcher developed by robotized filament winding: Simulation and experimental validation, Polymers, vol. 13 no. 4 (February, 2021), pp. 1-18 [doi]  [abs]
  25. Pradhan, B; Mukherjee, S; Saha, A; Natiq, H; Banerjee, S, Multistability and chaotic scenario in a quantum pair-ion plasma, Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences, vol. 76 no. 2 (February, 2021), pp. 109-119 [doi]  [abs]
  26. Mukherjee, S, Comments on “A fuzzy multi criteria approach for measuring sustainability performance of a supplier based on triple bottom line approach”, Journal of Cleaner Production, vol. 280 (January, 2021) [doi]  [abs]
  27. Spell, CS; Bezrukova, K; Mukherjee, S; Baveja, A, EVERY LITTLE BIT HELPS: DOES DIVERSITY IN POLICE DEPARTMENTS AND COMMUNITIES AFFECT ARREST RATES?, 81st Annual Meeting of the Academy of Management 2021: Bringing the Manager Back in Management, AoM 2021 (January, 2021) [doi]  [abs]
  28. Gastin, P; Mukherjee, S; Srivathsan, B, Reachability for updatable timed automata made faster and more effective, Leibniz International Proceedings in Informatics, LIPIcs, vol. 182 (December, 2020), ISBN 9783959771740 [doi]  [abs]
  29. Das, P; Mukherjee, S; Banerjee, S, Characterizing chaos and multifractality in noise-assisted tumor-immune interplay, Nonlinear Dynamics, vol. 101 no. 1 (July, 2020), pp. 675-685 [doi]  [abs]
  30. Mukherjee, S; Das, S; Mukherjee, S; Ghosh, PS; Bhattacharya, S, Arterial blood gas as a prognostic indicator in patients with sepsis., Indian journal of medical microbiology, vol. 38 no. 3 & 4 (July, 2020), pp. 457-460 [doi]  [abs]
  31. Das, P; Mukherjee, S, Stochastic dynamics of Michaelis–Menten kinetics based tumor-immune interactions, Physica A: Statistical Mechanics and its Applications, vol. 541 (March, 2020) [doi]  [abs]
  32. Mukherjee, S; Pramanik, A, Catalyst-Free One-Pot Three-Component Synthesis of 4-Hydroxy-3-pyrazolylcoumarins in Ethanol at Room Temperature: Enolisable Aroylhydrazones as Efficient Ambident Nucleophile, ACS Sustainable Chemistry and Engineering, vol. 8 no. 1 (January, 2020), pp. 403-414 [doi]  [abs]
  33. Luo, G; Mukherjee, S, In Search of Chaos and Complexity of a Cognitive Language-Learning System, Complexity, vol. 2020 (January, 2020) [doi]  [abs]
  34. Yan, B; Prasad, PK; Mukherjee, S; Saha, A; Banerjee, S; Pham, VT, Dynamical Complexity and Multistability in a Novel Lunar Wake Plasma System, Complexity, vol. 2020 (January, 2020) [doi]  [abs]
  35. Das, P; Mukherjee, S, Dynamics of effector -tumor- interleukin-2 interactions with monod-haldane immune response and treatments, Studies in Computational Intelligence, vol. 863 SCI (January, 2020), pp. 598-609, ISBN 9783030341510 [doi]  [abs]
  36. Yan, B; Palit, SK; Mukherjee, S; Banerjee, S, Signature of complexity in time–frequency domain, Physica A: Statistical Mechanics and its Applications, vol. 535 (December, 2019) [doi]  [abs]
  37. Yan, B; Mukherjee, S; He, S, A study on dynamical complexity of noise induced blood flow, European Physical Journal: Special Topics, vol. 228 no. 12 (December, 2019), pp. 2769-2777 [doi]  [abs]
  38. Das, P; Mukherjee, S, An investigation on Michaelis - Menten kinetics based complex dynamics of tumor - immune interaction, Chaos, Solitons and Fractals, vol. 128 (November, 2019), pp. 297-305 [doi]  [abs]
  39. Sen, S; Sengupta, S; Mukherjee, S; Dey, S; Ghosh, S; Das, R; Bal, S, Encryption in MicroSD card reader or USB Data storage devices, IEMECON 2019 - 9th Annual Information Technology, Electromechanical Engineering and Microelectronics Conference (March, 2019), pp. 232-236, ISBN 9781538693254 [doi]  [abs]
  40. Banerjee, I; Tribady, S; Mukherjee, S; Mallick, S; Bhowmik, DS; Mazumdar, S, Automated irrigation system using arduino and cloud, 2019 International Conference on Opto-Electronics and Applied Optics, Optronix 2019 (March, 2019), ISBN 9781728100708 [doi]  [abs]
  41. Mahato, CK; Mukherjee, S; Kundu, M; Pramanik, A, Pyrrolidine-Oxadiazolone Conjugates as Organocatalysts in Asymmetric Michael Reaction., The Journal of organic chemistry, vol. 84 no. 2 (January, 2019), pp. 1053-1063 [doi]  [abs]
  42. Gastin, P; Mukherjee, S; Srivathsan, B, Fast Algorithms for Handling Diagonal Constraints in Timed Automata, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 11561 LNCS (January, 2019), pp. 41-59, ISBN 9783030255398 [doi]  [abs]
  43. Mukherjee, S; Ghosh, D; De, RK, Expected return time to the initial state for biochemical systems with linear cyclic chains: unidirectional and bidirectional reactions, Sadhana - Academy Proceedings in Engineering Sciences, vol. 44 no. 1 (January, 2019) [doi]  [abs]
  44. Mukherjee, S; Banerjee, S; Rondoni, L, Dispersive graded entropy on computing dynamical complexity, Physica A: Statistical Mechanics and its Applications, vol. 508 (October, 2018), pp. 131-140 [doi]  [abs]
  45. Mukherjee, S; Hazra, S; Chowdhury, S; Sarkar, S; Chattopadhyay, K; Pramanik, A, A novel pyrrole fused coumarin based highly sensitive and selective fluorescence chemosensor for detection of Cu2+ ions and applications towards live cell imaging, Journal of Photochemistry and Photobiology A: Chemistry, vol. 364 (September, 2018), pp. 635-644 [doi]  [abs]
  46. Gastin, P; Mukherjee, S; Srivathsan, B, Reachability in timed automata with diagonal constraints, Leibniz International Proceedings in Informatics, LIPIcs, vol. 118 (August, 2018), ISBN 9783959770873 [doi]  [abs]
  47. Mukherjee, S; Sarkar, S; Pramanik, A, A Sustainable Synthesis of Functionalized Pyrrole Fused Coumarins under Solvent-Free Conditions Using Magnetic Nanocatalyst and a New Route to Polyaromatic Indolocoumarins, ChemistrySelect, vol. 3 no. 5 (February, 2018), pp. 1537-1544 [doi]  [abs]
  48. Maity, S; Das, D; Mallik, N; Chatterjee, S; Dutta, D; Mukherjee, S; Dutta, A; Sinha, D; Mukhopadhyay, A; Gangopadhyay, M, Isosceles 45°-45°-90° triangular microstrip antenna as triple band antenna, 2017 8th IEEE Annual Information Technology, Electronics and Mobile Communication Conference, IEMCON 2017 (November, 2017), pp. 501-505, ISBN 9781538633717 [doi]  [abs]
  49. Fataf, NAA; Palit, SK; Mukherjee, S; Said, MRM; Son, DH; Banerjee, S, Communication scheme using a hyperchaotic semiconductor laser model: Chaos shift key revisited, European Physical Journal Plus, vol. 132 no. 11 (November, 2017) [doi]  [abs]
  50. Palit, SK; Fataf, NAA; Md Said, MR; Mukherjee, S; Banerjee, S, Complexity in synchronized and non-synchronized states: A comparative analysis and application, European Physical Journal: Special Topics, vol. 226 no. 10 (July, 2017), pp. 2219-2234 [doi]  [abs]
  51. Mukherjee, S; Palit, SK; Banerjee, S; Wahab, AWA; Ariffin, MRK; Bhattacharya, DK, Computing two dimensional Poincaré maps for hyperchaotic dynamics, Applied Mathematics and Computation, vol. 301 (May, 2017), pp. 140-154 [doi]  [abs]
  52. Rondoni, L; Ariffin, MRK; Varatharajoo, R; Mukherjee, S; Palit, SK; Banerjee, S, Optical complexity in external cavity semiconductor laser, Optics Communications, vol. 387 (March, 2017), pp. 257-266 [doi]  [abs]
  53. Sahoo, H; Mukherjee, S; Grandhi, GS; Selvakumar, J; Baidya, M, Copper Catalyzed C-N Cross-Coupling Reaction of Aryl Boronic Acids at Room Temperature through Chelation Assistance., The Journal of organic chemistry, vol. 82 no. 5 (March, 2017), pp. 2764-2771 [doi]  [abs]
  54. Hoang, TM; Palit, SK; Mukherjee, S; Banerjee, S, Synchronization and secure communication in time delayed semiconductor laser systems, Optik, vol. 127 no. 22 (November, 2016), pp. 10930-10947 [doi]  [abs]
  55. Fataf, NAA; Mukherjee, S; Said, MRM; Rauf, UFA; Hina, AD; Banerjee, S, Synchronization between two discrete chaotic systems for secure communications, 2016 IEEE 6th International Conference on Communications and Electronics, IEEE ICCE 2016 (September, 2016), pp. 477-481, ISBN 9781509019311 [doi]  [abs]
  56. Mukherjee, S; Kundu, A; Pramanik, A, A new and efficient synthesis of pyrazole-fused isocoumarins on the solid surface of magnetically separable Fe3O4@SiO2-SO3H nanoparticles, Tetrahedron Letters, vol. 57 no. 19 (May, 2016), pp. 2103-2108 [doi]  [abs]
  57. Banerjee, S; Palit, SK; Mukherjee, S; Ariffin, MRK; Rondoni, L, Complexity in congestive heart failure: A time-frequency approach., Chaos (Woodbury, N.Y.), vol. 26 no. 3 (March, 2016), pp. 033105 [doi]  [abs]
  58. Dang, TS; Palit, SK; Mukherjee, S; Hoang, TM; Banerjee, S, Complexity and synchronization in stochastic chaotic systems, European Physical Journal: Special Topics, vol. 225 no. 1 (February, 2016), pp. 159-170 [doi]  [abs]
  59. Mukherjee, S; Chatterjee, G; Ghosh, M; Das, B; Majumder, D, Efficacy and toxicity assessment of different antibody based antiangiogenic drugs by computational docking method, Advances in Bioinformatics, vol. 2016 (January, 2016) [doi]  [abs]
  60. Debnath, K; Mukherjee, S; Bodhak, C; Pramanik, A, Facile one-pot three-component synthesis of diverse 2,3-disubstituted isoindolin-1-ones using ZrO2 nanoparticles as a reusable dual acid-base solid support under solvent-free conditions, RSC Advances, vol. 6 no. 25 (January, 2016), pp. 21127-21138 [doi]  [abs]
  61. Kundu, A; Mukherjee, S; Pramanik, A, Synthesis of a new class of pyrazole embedded spirocyclic scaffolds using magnetically separable Fe3O4@SiO2-SO3H nanoparticles as recyclable solid acid support, RSC Advances, vol. 5 no. 130 (December, 2015), pp. 107847-107856 [doi]  [abs]
  62. Mukherjee, S; Palit, SK; Banerjee, S; Ariffin, MRK; Rondoni, L; Bhattacharya, DK, Can complexity decrease in congestive heart failure?, Physica A: Statistical Mechanics and its Applications, vol. 439 (December, 2015), pp. 93-102 [doi]  [abs]
  63. Kumar Palit, S; Mukherjee, S; Banerjee, S; Ariffin, MRK; Bhattacharya, DK, Some time-delay finding measures and attractor reconstruction, Understanding Complex Systems, vol. 116 (January, 2015), pp. 215-256 [doi]  [abs]
  64. Mukherjee, S; Palit, SK; Bhattacharya, DK, Approximate discrete dynamics of EMG signal, Applied Mathematics and Computation, vol. 243 (September, 2014), pp. 879-888 [doi]  [abs]
  65. Romero, OS; Aragon, AA; Rahimi, N; Shima, D; Addamane, S; Rotter, TJ; Mukherjee, SD; Dawson, LR; Lester, LF; Balakrishnan, G, Transmission electron microscopy-based analysis of electrically conductive surface defects in large area GaSb homoepitaxial diodes grown using molecular beam epitaxy, Journal of Electronic Materials, vol. 43 no. 4 (April, 2014), pp. 926-930 [doi]  [abs]
  66. Mukherjee, S; Palit, SK; Banerjee, S; Ariffin, MRK; Bhattacharya, DK, Phase synchronization of instrumental music signals, European Physical Journal: Special Topics, vol. 223 no. 8 (January, 2014), pp. 1561-1577 [doi]  [abs]
  67. Rahimi, N; Aragon, AA; Romero, OS; Shima, DM; Rotter, TJ; Mukherjee, SD; Balakrishnan, G; Lester, LF, Low resistance palladium/molybdenum based ohmic contacts to n-GaSb grown on GaAs, Journal of Vacuum Science and Technology B: Microelectronics and Nanometer Structures, vol. 32 no. 4 (January, 2014) [doi]  [abs]
  68. Palit, SK; Mukherjee, S; Bhattacharya, DK, A high dimensional delay selection for the reconstruction of proper phase space with cross auto-correlation, Neurocomputing, vol. 113 (August, 2013), pp. 49-57 [doi]  [abs]
  69. Rahimi, N; Aragon, AA; Romero, OS; Kim, DM; Traynor, NBJ; Rotter, TJ; Balakrishnan, G; Mukherjee, SD; Lester, LF, Ohmic contacts to n-type GaSb grown on GaAs by the interfacial misfit dislocation technique, Proceedings of SPIE - The International Society for Optical Engineering, vol. 8620 (June, 2013), ISBN 9780819493897 [doi]  [abs]
  70. Rahimi, N; Aragon, AA; Romero, OS; Shima, DM; Rotter, TJ; Balakrishnan, G; Mukherjee, SD; Lester, LF, Ultra-low resistance NiGeAu and PdGeAu ohmic contacts on N-GaSb grown on GaAs, Conference Record of the IEEE Photovoltaic Specialists Conference (January, 2013), pp. 2123-2126, ISBN 9781479932993 [doi]  [abs]
  71. Mukherjee, S; Palit, SK; Bhattacharya, DK, Is one dimensional Poincaré map sufficient to describe the chaotic dynamics of a three dimensional system?, Applied Mathematics and Computation, vol. 219 no. 23 (January, 2013), pp. 11056-11064 [doi]  [abs]
  72. Mukherjee, S; Gall, D, Structure zone model for extreme shadowing conditions, Thin Solid Films, vol. 527 (January, 2013), pp. 158-163 [doi]  [abs]
  73. Rahimi, N; Aragon, AA; Romero, OS; Shima, DM; Rotter, TJ; Mukherjee, SD; Balakrishnan, G; Lester, LF, Electrical and microstructure analysis of nickel-based low-resistance ohmic contacts to n-GaSb, APL Materials, vol. 1 no. 6 (January, 2013) [doi]  [abs]
  74. Dey, A; Mukherjee, S; Palit, SK; Bhattacharya, DK; Tibarewala, DN, Are Meditative states distinguishable from the pre-meditative ones? A new alternative study, IEEE-International Conference on Advances in Engineering, Science and Management, ICAESM-2012 (July, 2012), pp. 456-461, ISBN 9781467302135  [abs]
  75. Crowley, MT; Patel, N; Saiz, TA; Emawy, ME; Nilsen, TA; Naderi, NA; Mukherjee, SD; Fimland, BO; Lester, LF, Modelling the spectral emission of multi-section quantum dot superluminescent light-emitting diodes, Semiconductor Science and Technology, vol. 27 no. 6 (June, 2012) [doi]  [abs]
  76. Palit, SK; Mukherjee, S; Bhattacharya, DK, New types of nonlinear auto-correlations of bivariate data and their applications, Applied Mathematics and Computation, vol. 218 no. 17 (May, 2012), pp. 8951-8967 [doi]  [abs]
  77. Raghunathan, R; Crowley, MT; Grillot, F; Mukherjee, SD; Usechak, NG; Kovanis, V; Lester, LF, Delay differential equation-based modeling of passively mode-locked quantum dot lasers using measured gain and loss spectra, Proceedings of SPIE - The International Society for Optical Engineering, vol. 8255 (April, 2012), ISBN 9780819488985 [doi]  [abs]
  78. Mukherjee, S; Garg, A; Kundu, D, Histoplasmosis of the periodontium - An uncommon condition, Indian Journal of Public Health Research and Development, vol. 3 no. 2 (April, 2012), pp. 4-6  [abs]
  79. Dey, A; Mukherjee, S; Palit, SK; Bhattacharya, DK; Tibarewala, DN, A new technique for the classification of pre-meditative and meditative states, Proceedings of the 2011 International Conference on Communication and Industrial Application, ICCIA 2011 (December, 2011), ISBN 9781457719172 [doi]  [abs]
  80. Patel, N; Crowley, MT; Saiz, TA; El-Emawy, M; Nilsen, TA; Naderi, NA; Mukherjee, SD; Fimland, BO; Lester, LF, Predicting the spectral shape of multi-section quantum dot superluminescent LEDs, IEEE Photonic Society 24th Annual Meeting, PHO 2011 (December, 2011), pp. 451-452, ISBN 9781424489404 [doi]  [abs]
  81. Mukherjee, S; Gall, D, Power law scaling during physical vapor deposition under extreme shadowing conditions, Journal of Applied Physics, vol. 107 no. 8 (April, 2010) [doi]  [abs]
  82. Keeler, GA; Serkland, DK; Overberg, ME; Geib, KM; Gill, DD; Mukherjee, SD; Hsu, AY; Clevenger, JB; Baiocchi, D; Sweatt, WC, High-speed reflective S-SEEDs for photonic logic circuits, 2009 International Conference on Photonics in Switching, PS '09 (December, 2009), ISBN 9781424438563 [doi]  [abs]
  83. Mukherjee, S; Gall, D, Anomalous scaling during glancing angle deposition, Applied Physics Letters, vol. 95 no. 17 (November, 2009) [doi]  [abs]
  84. Wang, X; Ezzahri, Y; Bian, Z; Zebarjadi, M; Shakouri, A; Klem, J; Patrizi, G; Young, EW; Mukherjee, SD, Characterization of single barrier microrefrigerators at cryogenic temperatures, Journal of Electronic Materials, vol. 38 no. 7 (July, 2009), pp. 1309-1314 [doi]  [abs]
  85. Mukherjee, S; Zhou, CM; Gall, D, Temperature-induced chaos during nanorod growth by physical vapor deposition, Journal of Applied Physics, vol. 105 no. 9 (June, 2009) [doi]  [abs]
  86. Mukherjee, S; Majumder, D, Computational molecular docking assessment of hormone receptor adjuvant drugs: Breast cancer as an example, Pathophysiology, vol. 16 no. 1 (June, 2009), pp. 19-29 [doi]  [abs]
  87. Keeler, GA; Serkland, DK; Hsu, AY; Mukherjee, SD; Geib, KM; Overberg, ME; Klem, JF, All-Optical XOR using 1550-nm high-speed s-SEEDs and integrated micro-Optics, 2008 International Conference on Photonics in Switching, PS 2008 (December, 2008), ISBN 9781424443260 [doi]  [abs]
  88. Bonnefoi H, Potti A, Delorenzi M, Mauriac L, Campone M, Tubiana-Hulin M, Petit T, Rouanet P, Jassem J, Blot E, Becette V, Farmer P, André S, Acharya CR, Mukherjee S, Cameron D, Bergh J, Nevins JR, Iggo RD., Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial., Lancet Oncology, vol. 8 no. 12 (December, 2007), pp. 1071-1078 [entrez]
  89. F. Liang, S. Mukherjee, M. West, Understanding the use of unlabelled data in predictive modelling, Statistical Science, vol. 22 no. 2 (Fall, 2007), pp. 189-205
  90. Jen-Tsan Chi1, Edwin H. Rodriguez, Zhen Wang, Dimitry S. A. Nuyten, Sayan Mukherjee, Matt van de Rijn, Marc J. van de Vijver, Trevor Hastie, Patrick O. Brown, Gene Expression Programs of Human Smooth Muscle Cells: Tissue-Specific Differentiation and Prognostic Significance in Breast Cancers, PLoS Genet, vol. 3 no. 9 (September, 2007), pp. 1770-1784 [pdf]
  91. Natesh Pillai, Qiang Wu, Feng Liang, Sayan Mukherjee, Robert L. Wolpert, Characterizing the function space for Bayesian kernel models, Journal of Machine Learning Research, vol. 8 (August, 2007), pp. 1769--1797 [html]  [abs]
  92. Liang Goh, Susan K. Murphy, Sayan Muhkerjee, and Terrence S. Furey, Genomic sweeping for hypermethylated genes, Bioinformatics, vol. 23 no. 3 (February, 2007), pp. 281-288 [btl620v1]
  93. Zhong Wang, Huntington F. Willard, Sayan Mukherjee, Terrence S. Furey, Evidence of Influence of Genomic DNA Sequence on Human X Chromosome Inactivation, Public Library of Science Computational Biology, vol. 2 no. 9 (Winter, 2006), pp. 979-988 [available here]
  94. S. Mukherjee and Q. Wu, Estimation of Gradients and Coordinate Covariation in Classification, Journal of Machine Learning Research, vol. 7 (November, 2006), pp. 2481--2514 [html]
  95. S. Mukherjee, DX. Zhou, Learning Coordinate Covariances via Gradients, Journal of Machine Learning Research, vol. 7 (March, 2006), pp. 519-549 [html]
  96. Elena Edelman, Alessandro Porrello, Justin Guinney, BalaBalakumaran, Andrea Bild, Phillip G. Febbo, and Sayan Mukherjee, Analysis of Sample Set Enrichment Scores: assaying the enrichment of sets of genes for individual samples in genome-wide expression profiles, Bioinformatics, vol. 22 no. 14 (2006), pp. e101-e116 [e108]
  97. Daniela Tropea, Gabriel Kreiman, Alvin Lyckman, Sayan Mukherjee, Hongbo Yu, Sam Horng and Mriganka Sur, Gene expression changes and molecular pathways mediating activity-dependent plasticity in visual cortex, Nature Neuroscience, vol. 9 (2006), pp. 660-668 [html]
  98. A. Potti, S. Mukherjee, R. Petersen, HK. Dressman, A. Bild, J. Koontz, R. Kratzke, MA. Watson, M. Kelley, A Genomic Strategy to Refine Prognosis in Early Stage Non-Small Cell Lung Carcinoma, New England Journal of Medicine, vol. 355 no. 6 (2006), pp. 570-580 [pdf]
  99. A. Subramanian, P. Tamayo, VK. Mootha, S. Mukherjee, BL. Ebert, MA. Gillette, A. Paulovich, SL. Pomeroy, TR. Golub, ES. Lander, JP. Mesirov, Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles, PNAS, vol. 102 no. 43 (October, 2005), pp. 15278-9 [15545]
  100. Mukherjee, S; De, S; Ghosh, Z; Dasgupta, S, A docking interaction study of the effect of critical mutations in ribonuclease A on protein-ligand binding, Biochemistry and Molecular Biology Education, vol. 33 no. 5 (September, 2005), pp. 335-343 [doi]  [abs]
  101. A. Rakhlin, D. Panchenko, S. Mukherjee, Risk Bounds for Mixture Density Estimation, ESAIM: Probability and Statistics, vol. 9 (June, 2005), pp. 220-229
  102. Sweet-Cordero, A., Mukherjee, S., You, H., Subramnian, S., Ladd, C., Roix, J., Mesirov, J.P., Golub, T.R., Jacks, T, An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis, Nature Genetics, vol. 37 no. 1 (January, 2005), pp. 48-55 [html]
  103. A. Rakhlin, S. Mukherjee, T. Poggio, Stability Results In Learning Theory, Analysis and Applications, vol. 3 no. 4 (2005), pp. 397–417 [html]
  104. P. Golland, F. Liang, S. Mukherjee, D. Panchenko, Permutation Tests for Classification, in Proceedings of Computational Learning Theory 2005, edited by P. Auer and R. Meir (2005), pp. 501-515, Springer-Verlag
  105. S. Mukherjee, P. Niyogi, T. Poggio, R. Rifkin, Statistical Learning: Stability is Sufficient for Generalization and Necessary and Sufficient for Consistency of Empirical Risk Minimization, Advances in Computational Mathematics, vol. 25 no. 1-3 (2005), pp. 161 - 193 [contribution.asp]
  106. R. Berger, PG. Febbo, PK. Majumder, JJ. Zhao, S. Mukherjee, T Campbell, WR. Sellers, TM. Roberts, M. Loda, TR. Golub, WC. Hahan, Androgen-Induced Differentiation and Tumorigenicity of Human Prostate Epithelial Cells, Cancer Research, vol. 64 (December, 2004), pp. 8867-8875 [8867]
  107. Vawter, GA; Bakke, T; Mukherjee, S; Sullivan, C, Adiabatic mode converters for photonic integrated circuits and devices, Proceedings of SPIE - The International Society for Optical Engineering, vol. 5355 (August, 2004), pp. 129-133 [doi]  [abs]
  108. T. Poggio, R. Rifkin, S. Mukherjee, P. Niyogi, Learning Theory: general conditions for predictivity, Nature, vol. 428 (March, 2004), pp. 419-422 [html]
  109. Tzeremes, G; Mukherjee, SD; Yu, PKL; Christodoulou, CG, Integration issues of a waveguide photodetector with a CPW fed three element slot antenna, IEEE Antennas and Propagation Society, AP-S International Symposium (Digest), vol. 2 (January, 2004), pp. 1455-1458 [doi]  [abs]
  110. R. Rifkin, S. Mukherjee, P. Tamayo, S. Ramaswamy, CH. Yeang, M. Reich, T. Poggio, ES. Lander, TR. Golub, JP. Mesirov, An Analytical Method for Multi-Class Cancer Classification, SIAM Reviews, vol. 45 no. 4 (Winter, 2003), pp. 706-723 [html]
  111. S. Mukherjee, P. Tamayo , S. Rogers, R. Rifkin, A. Engle, C. Campbell, TR. Golub, JP. Mesirov, Estimating Dataset Size Requirements for Classifying DNA Microarray Data, Journal of Computational Biology, vol. 10 no. 2 (April, 2003), pp. 119-142 [10.1089%2F106652703321825928]
  112. Mukherjee, SD; Hadley, GR; Geib, KM; Choquette, KD; Carter, TR; Fischer, AJ; Robinson, M; Sullivan, CT, Critical parameters for parallel interconnects using VCSEL arrays and fiber image guides, Proceedings of SPIE - The International Society for Optical Engineering, vol. 4942 (December, 2002), pp. 292-305 [doi]  [abs]
  113. LD. Miller, PM. Long,L. Wong, S. Mukherjee, LM. McShane, ET. Liu, Optimal gene expression analysis by microarrays, Cancer Cell, vol. 2 (November, 2002), pp. 353-361 [abstract]
  114. Bakke, T; Sullivan, CT; Mukherjee, SD, Polymeric optical spot-size transformer with vertical and lateral tapers, Journal of Lightwave Technology, vol. 20 no. 7 (July, 2002), pp. 1188-1197 [doi]  [abs]
  115. Bakke, T; Sullivan, CT; Mukherjee, SD, Polymeric buried core adiabatic optical spot-size transformer, Electronics Letters, vol. 38 no. 7 (March, 2002), pp. 319-321 [doi]  [abs]
  116. S. Pomeroy, P. Tamayo, M. Gaasenbeek, L. Sturla, M. Angelo, M. McLaughlin, J. Kim, L. Goumnerova, P. Black, C. Lau, J. Allen, D. Zigzag, J. Olson, T. Curran, C. Wetmore, J. Biegel, T. Poggio, S. Mukherjee, R. Rifkin, A. Califano, G. Stolovitzky, D. Louis, Prediction of central nervous system embryonal tumour outcome based of gene expression, Nature, vol. 415 no. 24 (January, 2002), pp. 436-442 [html]
  117. S. Ramaswamy, P. Tamayo, R. Rifkin, S. Mukherjee, CH Yeang, M. Angelo, C. Ladd, M. Reich, E. Latulippe, JP. Mesirov, T. Poggio, W. Gerald, M. Loda,, ES. Lander, TR. Golub, Multiclass cancer diagnosis using tumor gene expression signatures, PNAS, vol. 98 no. 26 (December, 2001), pp. 15149-15154 [15149]
  118. Bakke, T; Sullivan, CT; Mukherjee, SD, Optical spot-size transformer interfaces for photonic microsystem packaging with relaxed optical tolerance, Advances in Electronic Packaging, vol. 3 (December, 2001), pp. 1623-1628, ISBN 9780791835401  [abs]
  119. Bakke, T; Sullivan, CT; Mukherjee, SD, Vertically tapered core polymeric optical spot-size transformer, Electronics Letters, vol. 37 no. 24 (November, 2001), pp. 1475-1476 [doi]  [abs]
  120. O. Chapelle, V. Vapnik, O. Bousquet, S. Mukherjee, Choosing Multiple Parameters for Support Vector Machines, Machine Learning, vol. 46 no. 1-3 (March, 2001), pp. 131-159 [contribution.asp]
  121. Mukherjee, SD; Choquette, KD; Geib, KM; Hadley, GR; Carter, TR; Fischer, AJ; Sullivan, CT; Tatah, K, Characterization of Crosstalk Sources in Massively Parallel Datalinks Using VCSEL Arrays and Fiber Image Guides, Optics InfoBase Conference Papers (January, 2001), pp. 128-130, ISBN 1557526575  [abs]
  122. J. Weston, S. Mukherjee, O. Chapelle, M. Pontil, T. Poggio, V. Vapnik, Feature Selection for SVMs, in Proceedings of Advances in Neural Information Processing Systems, vol. 14 (2001), pp. 668-674
  123. CH Yeang, S. Ramaswamy, P. Tamayo, S. Mukherjee, R. Rifkin, M. Angelo, M. Reich, E. Lander, J. Mesirov, T. Golub, Molecular classification of multiple tumor types, Bioinformatics, vol. 1 no. 1 (2001), pp. 1-7 [S316]
  124. Choquette, KD; Hietala, VM; Geib, KM; Mukherjee, S; Allerman, AA, Hybrid integrated vcsel and driver arrays for optical interconnects, Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting-LEOS, vol. 2 (January, 2000), pp. 424-425  [abs]
  125. Mukherjee, SD; Geib, KM; Choquette, KD, Input coupling measurements for parallel optical interconnects using imaging fiber bundles and VCSEL arrays, Conference on Lasers and Electro-Optics Europe - Technical Digest (January, 2000), pp. 267  [abs]
  126. V. Vapnik, S. Mukherjee, Support vector method for multivariate density estimation, in Proceedings of Advances in Neural Information Processing Systems, edited by S. A. Solla, T. K. Leen, and K.R. Muller, vol. 12 (2000), pp. 659--665
  127. Bakke, T; Mukherjee, SD, Polymeric optical mode converter for hybrid photonic integrated circuits, Proceedings of SPIE - The International Society for Optical Engineering, vol. 3632 (January, 1999), pp. 234-241  [abs]
  128. Mukherjee, SD; Bakke, T, Active to passive element micro-assembly for photonic micro-systems, Proceedings of SPIE - The International Society for Optical Engineering, vol. 3666 (January, 1999), pp. 237-245  [abs]
  129. Mukherjee, SD, Manufacturability-compatible R&D in optoelectronics, Conference on Lasers and Electro-Optics Europe - Technical Digest (January, 1998), pp. 52  [abs]
  130. Bristow, J; Lehman, J; Hibbs-Brenner, M; Liu, Y; Marta, T; Goldberg, T; Kalweit, E; Mukherjee, SD; Walterson, B; Singh, DR; Sullivan, CT; Tyrone, BH; Ireland, TJ, Packaged AlGaAs Waveguide Modulator Array at 830 nm Wavelength, Journal of Lightwave Technology, vol. 13 no. 6 (January, 1995), pp. 1041-1056 [doi]  [abs]
  131. Hibbs-Brenner, MK; Mukherjee, SD; Grung, BL; Skogen, J, GaAs optoelectronic smart pixel arrays, Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting (December, 1993), pp. 672-673, ISBN 0780312635  [abs]
  132. Bristow, J; Sullivan, C; Mukherjee, S; Liu, Y; Husain, A, Progress and status of guided wave optical interconnection technology, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1849 (July, 1993), pp. 4-10 [doi]  [abs]
  133. Sullivan, CT; Mukherjee, SD; Kalweit, E; Marta, T; Goldberg, W; Hibbs-Brenner, MK; Walterson, R; Khan, MN, Linear AIGaAs/GaAs waveguide modulator at ? = 1.32 µm utilizing lateral mode interference, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1703 (December, 1992), pp. 256-263 [doi]  [abs]
  134. Sullivan, CT; Mukherjee, SD; Hibbs-Brenner, MK; Gopinath, A; Kalweit, E; Marta, T; Goldberg, W; Walterson, R, Switched time delay elements based on AlGaAs/GaAs optical waveguide technology at 1.32µm for optically controlled phased array antennas, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1703 (December, 1992), pp. 264-271 [doi]  [abs]
  135. Mukherjee, SD; Hibbs-Brenner, MK; Skogen, JD; Kalweit, EL, Fabrication of MSI level transmitter OEICs: A comparison between epi-in-a-well and the planar multifunctional epistructure (PME) approaches, LEOS Summer Topical Meeting (January, 1992), pp. B27-B28, ISBN 0780305221 [doi]
  136. Hibbs-Brenner, MK; Mukherjee, SD; Grung, BL; Skogen, J, Gaas oeics for optoelectronic smart pixels, LEOS Summer Topical Meeting (January, 1992), pp. C26-C27, ISBN 0780305221 [doi]
  137. Hibbs-Brenner, MK; Mukherjee, SD; Skogen, J; Grung, B; Kalweit, E; Bendett, MP, Design, fabrication, and performance of an integrated optoelectronic cellular array, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1563 (December, 1991), pp. 10-20, ISBN 0819406910  [abs]
  138. Mukherjee, SD; Skogen, JD; Hibbs-Brenner, MK; Sullivan, AT; Kalweit, EL; Walterson, RA, Monolithic integration of singlemode AIGaAs optical waveguides at 830 nm with GaAs E/D-Mesfets using planar multifunctional epistructure (PME) approach, Electronics Letters, vol. 27 no. 24 (November, 1991), pp. 2281-2283 [doi]  [abs]
  139. Bristow, JPG; Mukherjee, SD; Khan, MN; Hibbs-Brenner, MK; Sullivan, CT; Kalweit, E, High density waveguide modulator arrays for parallel interconnection, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1389 (April, 1991), pp. 535-546 [doi]  [abs]
  140. Swirhun, S; Bendett, MP; Sokolov, V; Bauhahn, PE; Sullivan, CT; Mactaggart, R; Mukherjee, SD; Hibbs-Brenner, MK; Mondal, JP, Mixed application MMIC technologies: progress in combining RF, digital, and photonic circuits, Proceedings of SPIE - The International Society for Optical Engineering, vol. 1475 (January, 1991), pp. 223-230, ISBN 0819405841  [abs]
  141. Hibbs-Brenner, M; Grung, B; Mukherjee, S; Skogen, J; Bendett, M; Walters, W, Design and fabrication of an integrated optoelectronic cellular array (December, 1990), pp. 19-20  [abs]
  142. Mukherjee, SD, Vertical sidewall reactive ion etching (rie) of gaas and al ga as (x=0.76) using bc1 he at equal rates, Proceedings of SPIE - The International Society for Optical Engineering, vol. 797 (April, 1987), pp. 110-117 [doi]  [abs]

Papers Accepted

  1. E. Edelman, J. Guinney, J-T. Chi, P.G. Febbo, and S. Mukherjee, Modeling Cancer Progression via Pathway Dependencies, Public Library of Science Computational Biology (2007) [html]

Papers Submitted

  1. Q. Wu, S. Mukherjee, F. Liang, Regularized sliced inverse regression for kernel models., Biometrika (2007) [html]
  2. F. Liang, K. Mao, M. Liao, S. Mukherjee and M. West, Non-parametric Bayesian kernel models, Biometrika (2007) [html]
  3. J. Guinney, Q. Wu, and S. Mukherjee, Estimating variable structure and dependence in Multi-task learning via gradients, Journal of Machine Learning Research (2007) [html]
  4. Q. Wu, J. Guinney, M. Maggioni, and S. Mukherjee, Learning gradients: predictive models that infer geometry and dependence, Journal of Machine Learning Research (2007) [html]
  5. S. Mukherjee, Q. Wu, D-X. Zhou, Learning Gradients and Feature Selection on Manifolds, Annals of Statistics (2007) [html]

Chapters

  1. Mukherjee, S; Palit, SK; Banerjee, S; Bhattacharya, DK, A comparative study on three different types of music based on same indian raga and their effects on human autonomic nervous systems, in Springer Proceedings in Complexity (January, 2015), pp. 243-254 [doi]  [abs]
  2. Lunagómez, S; Mukherjee, S; Wolpert, R, Priors on Hypergraphical Models via Simplicial Complexes, in Current Trends in Bayesian Methodology with Applications (January, 2015), pp. 391-414, ISBN 9781482235111 [doi]  [abs]

 

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